Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126086639 | . | G | A | CCDS7639.1:NM_000274.3:c.1192Cga>Tga_NP_000265.1:p.398R>* | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | ARG | A:398 | A:398 | 46.0 | 0.204 | H | -69.5 | -46.3 | 46.0 | 0.204 | 0.0 |
HOH |
2.969 |
NH1 |
O |
||
| ARG | B:398 | B:398 | 47.0 | 0.209 | H | -69.4 | -44.9 | 47.0 | 0.209 | 0.0 |
HOH |
3.343 |
CD |
O |
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| ARG | C:398 | C:398 | 45.0 | 0.2 | H | -67.6 | -44.9 | NA | NA | NA | |||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | ARG | A:398 | A:398 | 50.0 | 0.222 | H | -54.4 | -50.7 | NA | NA | NA | ||||||
| ARG | B:398 | B:398 | 51.0 | 0.227 | H | -58.9 | -46.0 | NA | NA | NA | |||||||||||||
| ARG | C:398 | C:398 | 49.0 | 0.218 | H | -56.8 | -44.7 | 49.0 | 0.218 | 0.0 |
HOH |
3.120 |
CG |
O |
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| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | ARG | A:398 | A:398 | 51.0 | 0.227 | H | -53.7 | -47.8 | 51.0 | 0.227 | 0.0 | ||||||
| ARG | B:398 | B:398 | 53.0 | 0.236 | H | -53.6 | -47.6 | 53.0 | 0.236 | 0.0 | |||||||||||||
| ARG | C:398 | C:398 | 52.0 | 0.231 | H | -52.6 | -48.1 | NA | NA | NA | |||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | ARG | A:398 | A:398 | 54.0 | 0.24 | H | -49.2 | -49.7 | 54.0 | 0.24 | 0.0 |
HOH |
3.259 |
N |
O |
||
| ARG | B:398 | B:398 | 52.0 | 0.231 | H | -54.3 | -49.1 | 52.0 | 0.231 | 0.0 |
HOH |
3.374 |
N |
O |
|||||||||
| ARG | C:398 | C:398 | 49.0 | 0.218 | H | -48.9 | -50.3 | NA | NA | NA | |||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | ARG | A:374 | A:398 | 53.0 | 0.236 | H | -56.4 | -49.4 | 53.0 | 0.236 | 0.0 |
HOH |
3.027 |
NH2 |
O |
||
| ARG | B:374 | B:398 | 51.0 | 0.227 | H | -54.2 | -49.8 | NA | NA | NA | |||||||||||||
| ARG | C:374 | C:398 | 53.0 | 0.236 | H | -60.8 | -49.5 | NA | NA | NA | |||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | ARG | A:363 | A:398 | 50.0 | 0.222 | H | -59.5 | -49.7 | 50.0 | 0.222 | 0.0 |
HOH |
3.073 |
CD |
O |
||
| ARG | B:363 | B:398 | 50.0 | 0.222 | H | -55.7 | -45.6 | 50.0 | 0.222 | 0.0 |
HOH |
3.069 |
NH1 |
O |
|||||||||
| ARG | C:363 | C:398 | 47.0 | 0.209 | H | -55.2 | -51.3 | 47.0 | 0.209 | 0.0 |
HOH |
2.610 |
NH1 |
O |
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| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | ARG | A:363 | A:398 | 51.0 | 0.227 | H | -61.0 | -42.2 | 51.0 | 0.227 | 0.0 |
HOH |
3.379 |
O |
O |
||
| ARG | B:363 | B:398 | 51.0 | 0.227 | H | -58.2 | -42.8 | 51.0 | 0.227 | 0.0 |
HOH |
2.862 |
NH1 |
O |
|||||||||
| ARG | C:363 | C:398 | 51.0 | 0.227 | H | -55.1 | -49.6 | NA | NA | NA | |||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ARG | A:363 | A:398 | 54.0 | 0.24 | H | -56.6 | -46.3 | 54.0 | 0.24 | 0.0 |
HOH |
3.357 |
O |
O |
||
| ARG | B:363 | B:398 | 50.0 | 0.222 | H | -56.3 | -46.8 | NA | NA | NA | |||||||||||||
| ARG | C:363 | C:398 | 53.0 | 0.236 | H | -57.6 | -45.1 | NA | NA | NA | |||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ARG | A:363 | A:398 | 53.0 | 0.236 | H | -61.5 | -45.3 | 53.0 | 0.236 | 0.0 |
HOH |
3.292 |
O |
O |
||
| ARG | B:363 | B:398 | 48.0 | 0.213 | H | -60.5 | -46.8 | 48.0 | 0.213 | 0.0 |
HOH |
3.161 |
CD |
O |
|||||||||
| ARG | C:363 | C:398 | 47.0 | 0.209 | H | -58.7 | -45.2 | NA | NA | NA | |||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | ARG | A:363 | A:398 | 50.0 | 0.222 | H | -58.7 | -43.2 | 50.0 | 0.222 | 0.0 |
HOH |
3.535 |
N |
O |
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| ARG | B:363 | B:398 | 57.0 | 0.253 | H | -61.7 | -39.4 | NA | NA | NA | |||||||||||||
| ARG | C:363 | C:398 | 50.0 | 0.222 | H | -56.3 | -45.1 | NA | NA | NA | |||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:363 | B:398 | 51.0 | 0.227 | H | -54.6 | -46.5 | 51.0 | 0.227 | 0.0 |
HOH |
2.714 |
NH2 |
O |
||
| ARG | B:363 | C:398 | 52.0 | 0.231 | H | -56.9 | -45.8 | 52.0 | 0.231 | 0.0 |
HOH |
3.341 |
O |
O |
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| ARG | C:363 | E:398 | 51.0 | 0.227 | H | -53.2 | -45.8 | NA | NA | NA | |||||||||||||
| ARG | D:363 | F:398 | 50.0 | 0.222 | H | -58.3 | -44.1 | NA | NA | NA | |||||||||||||
| ARG | E:363 | I:398 | 49.0 | 0.218 | H | -53.0 | -46.4 | NA | NA | NA | |||||||||||||
| ARG | F:363 | J:398 | 50.0 | 0.222 | H | -54.4 | -46.6 | NA | NA | NA | |||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:363 | A:398 | 52.0 | 0.231 | H | -56.3 | -42.3 | 52.0 | 0.231 | 0.0 |
HOH |
3.283 |
CG |
O |
||
| ARG | B:363 | B:398 | 54.0 | 0.24 | H | -55.1 | -41.5 | NA | NA | NA | |||||||||||||
| ARG | C:363 | C:398 | 53.0 | 0.236 | H | -59.7 | -41.6 | NA | NA | NA | |||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:363 | B:398 | 55.0 | 0.244 | H | -54.1 | -47.6 | 55.0 | 0.244 | 0.0 |
HOH |
3.336 |
N |
O |
||
| ARG | B:363 | A:398 | 53.0 | 0.236 | H | -54.5 | -49.2 | NA | NA | NA | |||||||||||||
| ARG | C:363 | C:398 | 53.0 | 0.236 | H | -55.4 | -48.3 | NA | NA | NA | |||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ARG | A:361 | A:398 | 47.0 | 0.209 | H | -59.5 | -47.6 | 47.0 | 0.209 | 0.0 |
HOH |
3.167 |
H |
O |
||
| ARG | B:361 | B:398 | 48.0 | 0.213 | H | -60.3 | -47.0 | 48.0 | 0.213 | 0.0 |
HOH |
3.250 |
H |
O |
|||||||||
| ARG | C:361 | C:398 | 52.0 | 0.231 | H | -59.8 | -47.2 | 52.0 | 0.231 | 0.0 |
HOH |
3.488 |
H |
O |
|||||||||
| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ARG | A:361 | A:398 | 52.0 | 0.231 | H | -62.9 | -46.0 | 52.0 | 0.231 | 0.0 |
HOH |
3.304 |
O |
O |
||
| ARG | B:361 | B:398 | 52.0 | 0.231 | H | -63.0 | -46.3 | 52.0 | 0.231 | 0.0 |
HOH |
3.332 |
H |
O |
|||||||||
| ARG | C:361 | C:398 | 53.0 | 0.236 | H | -63.1 | -45.7 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | ARG | A:398 | A:398 | 46.0 | 0.204 | H | -56.0 | -50.3 | |