Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126086650 | . | C | A | CCDS7639.1:NM_000274.3:c.1181tGt>tTt_NP_000265.1:p.394C>F | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | CYS | A:394 | A:394 | 0.0 | 0.0 | H | -71.4 | -36.3 | 0.0 | 0.0 | 0.0 |
HOH |
8.987 |
O |
O |
||
CYS | B:394 | B:394 | 0.0 | 0.0 | H | -68.0 | -37.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.656 |
O |
O |
|||||||||
CYS | C:394 | C:394 | 0.0 | 0.0 | H | -69.3 | -34.4 | NA | NA | NA | |||||||||||||
2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | CYS | A:394 | A:394 | 0.0 | 0.0 | H | -71.9 | -28.1 | NA | NA | NA | ||||||
CYS | B:394 | B:394 | 0.0 | 0.0 | H | -71.1 | -31.9 | NA | NA | NA | |||||||||||||
CYS | C:394 | C:394 | 0.0 | 0.0 | H | -69.5 | -29.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.724 |
O |
O |
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2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | CYS | A:394 | A:394 | 0.0 | 0.0 | H | -71.3 | -27.9 | 0.0 | 0.0 | 0.0 |
HOH |
9.598 |
CB |
O |
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CYS | B:394 | B:394 | 0.0 | 0.0 | H | -70.3 | -29.3 | 0.0 | 0.0 | 0.0 | |||||||||||||
CYS | C:394 | C:394 | 0.0 | 0.0 | H | -70.5 | -28.5 | NA | NA | NA | |||||||||||||
2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | CYS | A:394 | A:394 | 0.0 | 0.0 | H | -69.1 | -31.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.705 |
O |
O |
||
CYS | B:394 | B:394 | 0.0 | 0.0 | H | -68.8 | -34.7 | 0.0 | 0.0 | 0.0 |
HOH |
2.664 |
O |
O |
|||||||||
CYS | C:394 | C:394 | 0.0 | 0.0 | H | -69.6 | -29.7 | NA | NA | NA | |||||||||||||
6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | CYS | A:370 | A:394 | 0.0 | 0.0 | H | -70.8 | -31.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.772 |
O |
O |
||
CYS | B:370 | B:394 | 0.0 | 0.0 | H | -70.1 | -33.3 | NA | NA | NA | |||||||||||||
CYS | C:370 | C:394 | 0.0 | 0.0 | H | -70.1 | -32.2 | NA | NA | NA | |||||||||||||
5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -69.1 | -34.1 | 0.0 | 0.0 | 0.0 |
HOH |
2.779 |
O |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -71.6 | -31.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.741 |
O |
O |
|||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -65.2 | -32.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.702 |
O |
O |
|||||||||
6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -65.4 | -33.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.816 |
O |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -74.3 | -32.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.780 |
O |
O |
|||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -64.9 | -33.7 | NA | NA | NA | |||||||||||||
6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -69.7 | -35.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.767 |
O |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -69.3 | -32.4 | NA | NA | NA | |||||||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -73.0 | -31.3 | NA | NA | NA | |||||||||||||
6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -67.4 | -31.7 | 0.0 | 0.0 | 0.0 |
HOH |
2.873 |
O |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -65.8 | -30.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.667 |
O |
O |
|||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -68.7 | -31.9 | NA | NA | NA | |||||||||||||
7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -68.3 | -30.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.908 |
O |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -69.0 | -32.5 | NA | NA | NA | |||||||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -70.5 | -36.1 | NA | NA | NA | |||||||||||||
7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | CYS | A:359 | B:394 | 0.0 | 0.0 | H | -73.6 | -33.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.771 |
O |
O |
||
CYS | B:359 | C:394 | 0.0 | 0.0 | H | -70.1 | -33.9 | 0.0 | 0.0 | 0.0 |
HOH |
2.861 |
O |
O |
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CYS | C:359 | E:394 | 0.0 | 0.0 | H | -74.4 | -33.6 | NA | NA | NA | |||||||||||||
CYS | D:359 | F:394 | 0.0 | 0.0 | H | -70.6 | -34.0 | NA | NA | NA | |||||||||||||
CYS | E:359 | I:394 | 0.0 | 0.0 | H | -70.0 | -34.3 | NA | NA | NA | |||||||||||||
CYS | F:359 | J:394 | 0.0 | 0.0 | H | -71.1 | -35.2 | NA | NA | NA | |||||||||||||
7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | CYS | A:359 | A:394 | 0.0 | 0.0 | H | -70.2 | -35.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.445 |
SG |
O |
||
CYS | B:359 | B:394 | 0.0 | 0.0 | H | -68.9 | -36.0 | NA | NA | NA | |||||||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -70.6 | -34.7 | NA | NA | NA | |||||||||||||
7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | CYS | A:359 | B:394 | 0.0 | 0.0 | H | -72.1 | -29.8 | 0.0 | 0.0 | 0.0 |
HOH |
2.713 |
O |
O |
||
CYS | B:359 | A:394 | 0.0 | 0.0 | H | -71.5 | -32.4 | NA | NA | NA | |||||||||||||
CYS | C:359 | C:394 | 0.0 | 0.0 | H | -72.6 | -32.2 | NA | NA | NA | |||||||||||||
1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | CYS | A:357 | A:394 | 0.0 | 0.0 | H | -68.9 | -31.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.626 |
O |
O |
||
CYS | B:357 | B:394 | 0.0 | 0.0 | H | -69.6 | -31.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.677 |
O |
O |
|||||||||
CYS | C:357 | C:394 | 0.0 | 0.0 | H | -69.5 | -31.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.811 |
O |
O |
|||||||||
2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | CYS | A:357 | A:394 | 0.0 | 0.0 | H | -66.1 | -32.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.935 |
O |
O |
||
CYS | B:357 | B:394 | 0.0 | 0.0 | H | -66.1 | -32.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.694 |
O |
O |
|||||||||
CYS | C:357 | C:394 | 0.0 | 0.0 | H | -66.0 | -32.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | CYS | A:394 | A:394 | 0.0 | 0.0 | H | -66.0 | -35.1 |