Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126086666 . C A CCDS7639.1:NM_000274.3:c.1165Gat>Tat_NP_000265.1:p.389D>Y Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 ASP A:389 A:389 43.0 0.287 -161.4 -179.8 43.0 0.287 0.0
ASP B:389 B:389 42.0 0.28 -153.7 -175.8 42.0 0.28 0.0 HOH
 5.981
 OD1
 O
ASP C:389 C:389 39.0 0.26 -158.4 179.3 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 ASP A:389 A:389 40.0 0.267 -143.7 177.3 NA NA NA
ASP B:389 B:389 38.0 0.253 -145.1 176.1 NA NA NA
ASP C:389 C:389 37.0 0.247 -144.8 174.2 37.0 0.247 0.0 HOH
 2.715
 OD2
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 ASP A:389 A:389 38.0 0.253 -139.4 172.8 38.0 0.253 0.0 HOH
 9.968
 OD1
 O
ASP B:389 B:389 40.0 0.267 -139.5 172.8 40.0 0.267 0.0 HOH
 7.920
 N
 O
ASP C:389 C:389 39.0 0.26 -139.7 173.1 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 ASP A:389 A:389 34.0 0.227 -146.1 174.4 34.0 0.227 0.0 HOH
 9.815
 OD1
 O
ASP B:389 B:389 39.0 0.26 -144.8 -178.9 39.0 0.26 0.0 HOH
 3.306
 CG
 O
ASP C:389 C:389 37.0 0.247 -143.9 173.1 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 ASP A:365 A:389 133.0 0.887 360.0 -178.2 133.0 0.887 0.0 HOH
 3.746
 N
 O
ASP B:365 B:389 90.0 0.6 360.0 -179.6 NA NA NA
ASP C:365 C:389 118.0 0.787 360.0 -179.6 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 ASP A:354 A:389 40.0 0.267 -138.4 173.2 40.0 0.267 0.0 HOH
 2.529
 OD2
 O
ASP B:354 B:389 39.0 0.26 -144.1 -175.5 39.0 0.26 0.0 HOH
 2.973
 OD2
 O
ASP C:354 C:389 35.0 0.233 -149.5 171.6 35.0 0.233 0.0 HOH
 2.659
 OD2
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 ASP A:354 A:389 46.0 0.307 -139.1 -176.5 46.0 0.307 0.0 HOH
 2.375
 OD2
 O
ASP B:354 B:389 40.0 0.267 -144.4 178.4 40.0 0.267 0.0 HOH
 3.405
 CB
 O
ASP C:354 C:389 45.0 0.3 -142.7 176.7 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ASP A:354 A:389 39.0 0.26 -145.8 -176.2 39.0 0.26 0.0 HOH
 3.146
 CG
 O
ASP B:354 B:389 46.0 0.307 -148.3 -178.0 NA NA NA
ASP C:354 C:389 37.0 0.247 -145.5 -172.1 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ASP A:354 A:389 29.0 0.193 -150.8 -177.7 29.0 0.193 0.0 HOH
 2.639
 OD2
 O
ASP B:354 B:389 48.0 0.32 -151.3 -173.0 48.0 0.32 0.0 HOH
 3.227
 OD2
 O
ASP C:354 C:389 36.0 0.24 -158.8 -177.5 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 ASP A:354 A:389 39.0 0.26 -155.2 174.2 39.0 0.26 0.0 HOH
 6.869
 OD1
 O
ASP B:354 B:389 25.0 0.167 -139.5 -176.2 NA NA NA
ASP C:354 C:389 22.0 0.147 -143.2 179.6 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ASP A:354 B:389 39.0 0.26 -142.8 -176.1 39.0 0.26 0.0 HOH
 3.270
 CB
 O
ASP B:354 C:389 50.0 0.333 -131.9 -173.3 50.0 0.333 0.0 HOH
 7.054
 CB
 O
ASP C:354 E:389 42.0 0.28 -149.3 -177.1 NA NA NA
ASP D:354 F:389 51.0 0.34 -130.4 -171.5 NA NA NA
ASP E:354 I:389 47.0 0.313 -141.2 -178.5 NA NA NA
ASP F:354 J:389 48.0 0.32 -136.7 -179.6 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ASP A:354 A:389 37.0 0.247 -166.0 176.1 37.0 0.247 0.0 HOH
 4.031
 OD2
 O
ASP B:354 B:389 42.0 0.28 -161.8 178.1 NA NA NA
ASP C:354 C:389 24.0 0.16 -135.4 -177.3 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ASP A:354 B:389 53.0 0.353 -155.9 175.3 53.0 0.353 0.0 HOH
 6.135
 OD2
 O
ASP B:354 A:389 50.0 0.333 -156.4 175.3 NA NA NA
ASP C:354 C:389 51.0 0.34 -156.5 175.2 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ASP A:352 A:389 37.0 0.247 -161.9 167.8 37.0 0.247 0.0 HOH
 7.963
 H
 O
ASP B:352 B:389 36.0 0.24 -161.9 167.6 36.0 0.24 0.0
ASP C:352 C:389 37.0 0.247 -162.6 168.0 37.0 0.247 0.0 HOH
 9.316
 CB
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ASP A:352 A:389 35.0 0.233 -155.3 175.2 35.0 0.233 0.0
ASP B:352 B:389 37.0 0.247 -155.0 175.1 37.0 0.247 0.0
ASP C:352 C:389 36.0 0.24 -154.9 175.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 ASP A:389 A:389 36.0 0.24 -135.4 170.2