Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126089418 | . | C | A | CCDS7639.1:NM_000274.3:c.1150Gaa>Taa_NP_000265.1:p.384E>* | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | GLU | A:384 | A:384 | 119.0 | 0.626 | -69.0 | 108.0 | 119.0 | 0.626 | 0.0 |
HOH |
4.582 |
O |
O |
|||
| GLU | B:384 | B:384 | 122.0 | 0.642 | -57.1 | 111.3 | 122.0 | 0.642 | 0.0 |
HOH |
6.657 |
OE1 |
O |
||||||||||
| GLU | C:384 | C:384 | 124.0 | 0.653 | -60.8 | 113.4 | NA | NA | NA | ||||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | GLU | A:384 | A:384 | 87.0 | 0.458 | -63.3 | 144.1 | NA | NA | NA | |||||||
| GLU | B:384 | B:384 | 92.0 | 0.484 | -60.8 | 137.2 | NA | NA | NA | ||||||||||||||
| GLU | C:384 | C:384 | 97.0 | 0.511 | -62.8 | 138.6 | 97.0 | 0.511 | 0.0 |
HOH |
2.389 |
OE1 |
O |
||||||||||
| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | GLU | A:384 | A:384 | 91.0 | 0.479 | -59.2 | 137.1 | 91.0 | 0.479 | 0.0 | |||||||
| GLU | B:384 | B:384 | 93.0 | 0.489 | -59.1 | 137.2 | 93.0 | 0.489 | 0.0 |
HOH |
5.864 |
OE1 |
O |
||||||||||
| GLU | C:384 | C:384 | 94.0 | 0.495 | -59.7 | 137.0 | NA | NA | NA | ||||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | GLU | A:384 | A:384 | 97.0 | 0.511 | -65.3 | 134.0 | 97.0 | 0.511 | 0.0 | |||||||
| GLU | B:384 | B:384 | 91.0 | 0.479 | -64.5 | 137.0 | 91.0 | 0.479 | 0.0 |
HOH |
5.137 |
OE2 |
O |
||||||||||
| GLU | C:384 | C:384 | 91.0 | 0.479 | -65.0 | 137.9 | NA | NA | NA | ||||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | GLU | A:360 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| GLU | B:360 | B:384 | 82.0 | NA | -68.1 | 132.5 | NA | NA | NA | ||||||||||||||
| GLU | C:360 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | GLU | A:349 | A:384 | 91.0 | 0.479 | -68.2 | 122.6 | 91.0 | 0.479 | 0.0 |
HOH |
5.169 |
OE2 |
O |
|||
| GLU | B:349 | B:384 | 93.0 | 0.489 | -61.3 | 135.9 | 93.0 | 0.489 | 0.0 |
HOH |
4.577 |
N |
O |
||||||||||
| GLU | C:349 | C:384 | 96.0 | 0.505 | -60.3 | 131.0 | 96.0 | 0.505 | 0.0 |
HOH |
3.094 |
OE2 |
O |
||||||||||
| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | GLU | A:349 | A:384 | 87.0 | 0.458 | -64.6 | 137.8 | 87.0 | 0.458 | 0.0 |
HOH |
7.584 |
OE1 |
O |
|||
| GLU | B:349 | B:384 | 85.0 | 0.447 | -63.3 | 127.1 | 85.0 | 0.447 | 0.0 |
HOH |
2.578 |
OE2 |
O |
||||||||||
| GLU | C:349 | C:384 | 92.0 | 0.484 | -57.8 | 128.9 | NA | NA | NA | ||||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | GLU | A:349 | A:384 | 120.0 | 0.632 | -61.7 | 140.8 | 120.0 | 0.632 | 0.0 |
HOH |
3.573 |
CB |
O |
|||
| GLU | B:349 | B:384 | 109.0 | 0.574 | -66.7 | 136.8 | NA | NA | NA | ||||||||||||||
| GLU | C:349 | C:384 | 122.0 | 0.642 | -65.9 | 130.3 | NA | NA | NA | ||||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | GLU | A:349 | A:384 | 94.0 | 0.495 | -73.1 | 121.2 | 94.0 | 0.495 | 0.0 |
HOH |
3.490 |
OE2 |
O |
|||
| GLU | B:349 | B:384 | 99.0 | 0.521 | -67.2 | 131.6 | 99.0 | 0.521 | 0.0 |
HOH |
5.529 |
OE2 |
O |
||||||||||
| GLU | C:349 | C:384 | 104.0 | 0.547 | -71.2 | 91.2 | NA | NA | NA | ||||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | GLU | A:349 | A:384 | 72.0 | 0.379 | -71.0 | 88.6 | 72.0 | 0.379 | 0.0 | |||||||
| GLU | B:349 | B:384 | 75.0 | 0.395 | -68.5 | 104.6 | NA | NA | NA | ||||||||||||||
| GLU | C:349 | C:384 | 78.0 | 0.411 | -68.9 | 113.5 | NA | NA | NA | ||||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | GLU | A:349 | B:384 | 95.0 | 0.5 | -57.9 | 114.5 | 95.0 | 0.5 | 0.0 |
HOH |
2.538 |
OE2 |
O |
|||
| GLU | B:349 | C:384 | 100.0 | 0.526 | -59.2 | 132.7 | 100.0 | 0.526 | 0.0 |
HOH |
2.707 |
OE2 |
O |
||||||||||
| GLU | C:349 | E:384 | 100.0 | 0.526 | -57.9 | 114.9 | NA | NA | NA | ||||||||||||||
| GLU | D:349 | F:384 | 98.0 | 0.516 | -61.8 | 136.4 | NA | NA | NA | ||||||||||||||
| GLU | E:349 | I:384 | 93.0 | 0.489 | -61.5 | 121.2 | NA | NA | NA | ||||||||||||||
| GLU | F:349 | J:384 | 93.0 | 0.489 | -62.9 | 122.0 | NA | NA | NA | ||||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | GLU | A:349 | A:384 | 115.0 | 0.605 | -68.0 | 132.4 | 115.0 | 0.605 | 0.0 |
HOH |
5.031 |
CG |
O |
|||
| GLU | B:349 | B:384 | 103.0 | 0.542 | -69.2 | 124.1 | NA | NA | NA | ||||||||||||||
| GLU | C:349 | C:384 | 96.0 | 0.505 | -77.7 | 129.3 | NA | NA | NA | ||||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | GLU | A:349 | B:384 | 80.0 | 0.421 | -69.4 | 122.3 | 80.0 | 0.421 | 0.0 | |||||||
| GLU | B:349 | A:384 | 91.0 | 0.479 | -69.6 | 120.0 | NA | NA | NA | ||||||||||||||
| GLU | C:349 | C:384 | 93.0 | 0.489 | -69.1 | 121.5 | NA | NA | NA | ||||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | GLU | A:347 | A:384 | 124.0 | 0.653 | -63.5 | 124.4 | 124.0 | 0.653 | 0.0 | |||||||
| GLU | B:347 | B:384 | 123.0 | 0.647 | -63.6 | 124.7 | 123.0 | 0.647 | 0.0 |
HOH |
7.421 |
O |
O |
||||||||||
| GLU | C:347 | C:384 | 124.0 | 0.653 | -63.6 | 125.2 | 124.0 | 0.653 | 0.0 |
HOH |
7.735 |
OE2 |
O |
||||||||||
| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | GLU | A:347 | A:384 | 115.0 | 0.605 | -64.2 | 129.5 | 115.0 | 0.605 | 0.0 | |||||||
| GLU | B:347 | B:384 | 114.0 | 0.6 | -63.4 | 129.2 | 114.0 | 0.6 | 0.0 | ||||||||||||||
| GLU | C:347 | C:384 | 114.0 | 0.6 | -63.9 | 129.0 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | GLU | A:384 | A:384 | 96.0 | 0.505 | -50.6 | 137.8 | ||