Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126090306 . C A CCDS7639.1:NM_000274.3:c.1003Gca>Tca_NP_000265.1:p.335A>S Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 ALA A:335 A:335 5.0 0.043 H -59.8 -43.4 5.0 0.043 0.0 HOH
 3.684
 N
 O
ALA B:335 B:335 6.0 0.052 H -58.3 -42.2 6.0 0.052 0.0 HOH
 3.935
 N
 O
ALA C:335 C:335 5.0 0.043 H -60.2 -41.2 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 ALA A:335 A:335 6.0 0.052 H -64.9 -42.6 NA NA NA
ALA B:335 B:335 4.0 0.035 H -66.1 -37.6 NA NA NA
ALA C:335 C:335 4.0 0.035 H -65.0 -42.0 4.0 0.035 0.0 HOH
 3.388
 CA
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 ALA A:335 A:335 4.0 0.035 H -63.9 -39.1 4.0 0.035 0.0 HOH
 3.761
 N
 O
ALA B:335 B:335 4.0 0.035 H -63.7 -39.7 4.0 0.035 0.0
ALA C:335 C:335 5.0 0.043 H -64.0 -39.4 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 ALA A:335 A:335 6.0 0.052 H -62.5 -41.7 6.0 0.052 0.0 HOH
 3.775
 N
 O
ALA B:335 B:335 4.0 0.035 H -64.4 -41.1 4.0 0.035 0.0 HOH
 3.577
 CA
 O
ALA C:335 C:335 4.0 0.035 H -67.3 -36.6 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 ALA A:311 A:335 5.0 0.043 H -61.7 -39.5 5.0 0.043 0.0 HOH
 3.531
 CA
 O
ALA B:311 B:335 5.0 0.043 H -60.4 -42.9 NA NA NA
ALA C:311 C:335 5.0 0.043 H -60.5 -42.8 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 ALA A:300 A:335 6.0 0.052 H -62.7 -42.9 6.0 0.052 0.0 HOH
 3.462
 CA
 O
ALA B:300 B:335 9.0 0.078 H -63.3 -41.2 9.0 0.078 0.0 HOH
 3.654
 CA
 O
ALA C:300 C:335 6.0 0.052 H -64.7 -46.1 6.0 0.052 0.0 HOH
 3.706
 N
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 ALA A:300 A:335 6.0 0.052 H -68.6 -39.5 6.0 0.052 0.0 HOH
 3.488
 CB
 O
ALA B:300 B:335 4.0 0.035 H -67.0 -35.6 4.0 0.035 0.0 HOH
 3.622
 CA
 O
ALA C:300 C:335 5.0 0.043 H -65.3 -38.1 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ALA A:300 A:335 2.0 0.017 H -61.3 -41.1 2.0 0.017 0.0 HOH
 4.648
 CB
 O
ALA B:300 B:335 5.0 0.043 H -62.8 -41.5 NA NA NA
ALA C:300 C:335 4.0 0.035 H -62.5 -42.1 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ALA A:300 A:335 4.0 0.035 H -64.2 -39.3 4.0 0.035 0.0 HOH
 3.754
 N
 O
ALA B:300 B:335 4.0 0.035 H -63.0 -38.5 4.0 0.035 0.0 HOH
 3.866
 N
 O
ALA C:300 C:335 4.0 0.035 H -63.6 -41.2 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 ALA A:300 A:335 4.0 0.035 H -67.7 -42.8 4.0 0.035 0.0 HOH
 3.817
 N
 O
ALA B:300 B:335 5.0 0.043 H -67.9 -40.5 NA NA NA
ALA C:300 C:335 6.0 0.052 H -64.4 -42.6 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:300 B:335 5.0 0.043 H -64.5 -37.4 5.0 0.043 0.0 HOH
 3.552
 CA
 O
ALA B:300 C:335 5.0 0.043 H -64.0 -38.6 5.0 0.043 0.0 HOH
 3.469
 CA
 O
ALA C:300 E:335 3.0 0.026 H -63.7 -38.6 NA NA NA
ALA D:300 F:335 5.0 0.043 H -62.3 -39.5 NA NA NA
ALA E:300 I:335 5.0 0.043 H -64.5 -39.0 NA NA NA
ALA F:300 J:335 6.0 0.052 H -63.9 -39.3 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:300 A:335 5.0 0.043 H -63.1 -39.5 5.0 0.043 0.0 HOH
 8.353
 O
 O
ALA B:300 B:335 3.0 0.026 H -62.7 -39.8 NA NA NA
ALA C:300 C:335 3.0 0.026 H -62.8 -43.0 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:300 B:335 5.0 0.043 H -58.0 -44.3 5.0 0.043 0.0 HOH
 3.492
 CA
 O
ALA B:300 A:335 4.0 0.035 H -59.1 -43.5 NA NA NA
ALA C:300 C:335 5.0 0.043 H -60.0 -41.9 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ALA A:298 A:335 5.0 0.043 H -63.0 -43.6 5.0 0.043 0.0 HOH
 3.160
 H
 O
ALA B:298 B:335 5.0 0.043 H -63.1 -43.6 5.0 0.043 0.0 HOH
 3.532
 H
 O
ALA C:298 C:335 5.0 0.043 H -63.9 -43.9 5.0 0.043 0.0 HOH
 4.946
 H
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ALA A:298 A:335 4.0 0.035 H -63.7 -45.9 4.0 0.035 0.0 HOH
 4.080
 CA
 O
ALA B:298 B:335 4.0 0.035 H -63.9 -46.4 4.0 0.035 0.0 HOH
 3.614
 H
 O
ALA C:298 C:335 5.0 0.043 H -64.1 -45.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 ALA A:335 A:335 4.0 0.035 H -61.3 -36.6