Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126090315 | . | C | A | CCDS7639.1:NM_000274.3:c.994Gtg>Ttg_NP_000265.1:p.332V>L | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | VAL | A:332 | A:332 | 0.0 | 0.0 | H | -71.2 | -28.5 | 0.0 | 0.0 | 0.0 |
HOH |
5.193 |
N |
O |
||
VAL | B:332 | B:332 | 0.0 | 0.0 | H | -67.4 | -32.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.873 |
N |
O |
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VAL | C:332 | C:332 | 0.0 | 0.0 | H | -67.9 | -29.8 | NA | NA | NA | |||||||||||||
2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | VAL | A:332 | A:332 | 0.0 | 0.0 | H | -71.2 | -30.6 | NA | NA | NA | ||||||
VAL | B:332 | B:332 | 0.0 | 0.0 | H | -69.3 | -35.0 | NA | NA | NA | |||||||||||||
VAL | C:332 | C:332 | 0.0 | 0.0 | H | -66.6 | -32.8 | 0.0 | 0.0 | 0.0 |
HOH |
4.719 |
N |
O |
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2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | VAL | A:332 | A:332 | 0.0 | 0.0 | H | -72.9 | -31.0 | 0.0 | 0.0 | 0.0 |
HOH |
4.672 |
N |
O |
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VAL | B:332 | B:332 | 0.0 | 0.0 | H | -73.9 | -30.1 | 0.0 | 0.0 | 0.0 | |||||||||||||
VAL | C:332 | C:332 | 0.0 | 0.0 | H | -73.2 | -31.3 | NA | NA | NA | |||||||||||||
2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | VAL | A:332 | A:332 | 0.0 | 0.0 | H | -74.0 | -30.7 | 0.0 | 0.0 | 0.0 |
HOH |
4.939 |
N |
O |
||
VAL | B:332 | B:332 | 0.0 | 0.0 | H | -69.2 | -36.0 | 0.0 | 0.0 | 0.0 |
HOH |
5.092 |
N |
O |
|||||||||
VAL | C:332 | C:332 | 0.0 | 0.0 | H | -70.6 | -31.1 | NA | NA | NA | |||||||||||||
6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | VAL | A:308 | A:332 | 0.0 | 0.0 | H | -54.3 | -44.7 | 0.0 | 0.0 | 0.0 |
HOH |
4.753 |
N |
O |
||
VAL | B:308 | B:332 | 0.0 | 0.0 | H | -56.6 | -46.1 | NA | NA | NA | |||||||||||||
VAL | C:308 | C:332 | 0.0 | 0.0 | H | -56.7 | -43.0 | NA | NA | NA | |||||||||||||
5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -63.2 | -43.9 | 0.0 | 0.0 | 0.0 |
HOH |
4.893 |
N |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -62.9 | -44.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.868 |
N |
O |
|||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -57.9 | -45.2 | 0.0 | 0.0 | 0.0 |
HOH |
4.721 |
N |
O |
|||||||||
6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -76.8 | -30.0 | 0.0 | 0.0 | 0.0 |
HOH |
4.882 |
N |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -62.1 | -45.8 | 0.0 | 0.0 | 0.0 |
HOH |
4.886 |
N |
O |
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VAL | C:297 | C:332 | 0.0 | 0.0 | H | -60.3 | -47.0 | NA | NA | NA | |||||||||||||
6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -64.5 | -44.2 | 0.0 | 0.0 | 0.0 |
HOH |
5.974 |
N |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -63.4 | -45.0 | NA | NA | NA | |||||||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -65.7 | -43.9 | NA | NA | NA | |||||||||||||
6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -70.4 | -29.3 | 0.0 | 0.0 | 0.0 |
HOH |
4.984 |
N |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -56.6 | -44.1 | 0.0 | 0.0 | 0.0 |
HOH |
5.197 |
N |
O |
|||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -57.5 | -44.0 | NA | NA | NA | |||||||||||||
7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -66.8 | -43.0 | 0.0 | 0.0 | 0.0 |
HOH |
4.870 |
N |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -61.8 | -41.2 | NA | NA | NA | |||||||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -61.5 | -43.7 | NA | NA | NA | |||||||||||||
7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:297 | B:332 | 0.0 | 0.0 | H | -60.0 | -44.8 | 0.0 | 0.0 | 0.0 |
HOH |
4.789 |
N |
O |
||
VAL | B:297 | C:332 | 0.0 | 0.0 | H | -59.9 | -43.4 | 0.0 | 0.0 | 0.0 |
HOH |
4.926 |
N |
O |
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VAL | C:297 | E:332 | 0.0 | 0.0 | H | -59.9 | -44.0 | NA | NA | NA | |||||||||||||
VAL | D:297 | F:332 | 0.0 | 0.0 | H | -58.7 | -44.5 | NA | NA | NA | |||||||||||||
VAL | E:297 | I:332 | 0.0 | 0.0 | H | -57.9 | -43.3 | NA | NA | NA | |||||||||||||
VAL | F:297 | J:332 | 0.0 | 0.0 | H | -57.2 | -42.9 | NA | NA | NA | |||||||||||||
7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:297 | A:332 | 0.0 | 0.0 | H | -61.6 | -42.0 | 0.0 | 0.0 | 0.0 |
HOH |
7.423 |
CG1 |
O |
||
VAL | B:297 | B:332 | 0.0 | 0.0 | H | -61.7 | -42.5 | NA | NA | NA | |||||||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -58.0 | -41.1 | NA | NA | NA | |||||||||||||
7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:297 | B:332 | 0.0 | 0.0 | H | -57.0 | -47.2 | 0.0 | 0.0 | 0.0 |
HOH |
4.847 |
N |
O |
||
VAL | B:297 | A:332 | 0.0 | 0.0 | H | -56.0 | -45.6 | NA | NA | NA | |||||||||||||
VAL | C:297 | C:332 | 0.0 | 0.0 | H | -57.2 | -46.2 | NA | NA | NA | |||||||||||||
1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | VAL | A:295 | A:332 | 0.0 | 0.0 | H | -66.4 | -36.1 | 0.0 | 0.0 | 0.0 |
HOH |
4.853 |
N |
O |
||
VAL | B:295 | B:332 | 0.0 | 0.0 | H | -66.3 | -36.9 | 0.0 | 0.0 | 0.0 |
HOH |
4.799 |
N |
O |
|||||||||
VAL | C:295 | C:332 | 0.0 | 0.0 | H | -66.4 | -36.9 | 0.0 | 0.0 | 0.0 |
HOH |
6.490 |
N |
O |
|||||||||
2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | VAL | A:295 | A:332 | 0.0 | 0.0 | H | -65.7 | -36.7 | 0.0 | 0.0 | 0.0 |
HOH |
7.033 |
O |
O |
||
VAL | B:295 | B:332 | 0.0 | 0.0 | H | -65.3 | -37.0 | 0.0 | 0.0 | 0.0 |
HOH |
5.043 |
N |
O |
|||||||||
VAL | C:295 | C:332 | 0.0 | 0.0 | H | -65.4 | -36.9 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | VAL | A:332 | A:332 | 0.0 | 0.0 | H | -61.9 | -42.9 |