Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126090357 . C A CCDS7639.1:NM_000274.3:c.952Gag>Tag_NP_000265.1:p.318E>* Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLU A:318 A:318 84.0 0.442 S -91.8 -11.7 35.0 0.184 0.258 B:P04181:0.258
 HOH
 2.640
 O
 O
GLU B:318 B:318 83.0 0.437 S -94.6 -13.7 34.0 0.179 0.258 A:P04181:0.258
 HOH
 2.601
 O
 O
GLU C:318 C:318 83.0 0.437 S -89.2 -11.7 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLU A:318 A:318 86.0 0.453 S -92.3 -0.5 NA NA NA
GLU B:318 B:318 86.0 0.453 S -94.4 -4.4 NA NA NA
GLU C:318 C:318 85.0 0.447 S -98.1 -1.2 85.0 0.447 0.0 HOH
 2.315
 OE2
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLU A:318 A:318 87.0 0.458 S -95.7 -0.0 36.0 0.189 0.269 B:P04181:0.268
 HOH
 9.319
 O
 O
GLU B:318 B:318 87.0 0.458 S -95.8 -0.1 37.0 0.195 0.263 A:P04181:0.263
 HOH
 3.378
 OE2
 O
GLU C:318 C:318 85.0 0.447 S -95.8 0.9 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLU A:318 A:318 68.0 0.358 S -92.7 -8.2 16.0 0.084 0.274 B:P04181:0.274
 HOH
 2.594
 OE2
 O
GLU B:318 B:318 88.0 0.463 S -84.0 -7.0 34.0 0.179 0.284 A:P04181:0.284
 HOH
 2.546
 O
 O
GLU C:318 C:318 85.0 0.447 S -83.0 -14.7 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLU A:294 A:318 80.0 0.421 S -94.3 -3.9 30.0 0.158 0.263 A:P04181:0.263
 HOH
 2.572
 O
 O
GLU B:294 B:318 79.0 0.416 S -93.3 -2.7 NA NA NA
GLU C:294 C:318 83.0 0.437 S -91.8 -3.3 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLU A:283 A:318 86.0 0.453 S -94.2 0.3 36.0 0.189 0.264 B:P04181:0.263
 9QJ
HOH
 7.687
2.367
 C
OE2
 O2F
O
GLU B:283 B:318 83.0 0.437 S -97.4 0.2 35.0 0.184 0.253 A:P04181:0.253
 9QJ
HOH
 7.675
2.609
 C
O
 O1F
O
GLU C:283 C:318 83.0 0.437 S -95.2 1.7 83.0 0.437 0.0 HOH
 2.814
 OE2
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLU A:283 A:318 79.0 0.416 S -95.5 -2.3 33.0 0.174 0.242 B:P04181:0.242
 MQ4
HOH
 8.168
2.704
 N
O
 O11
O
GLU B:283 B:318 79.0 0.416 S -102.2 -1.2 31.0 0.163 0.253 A:P04181:0.253
 HOH
 2.539
 O
 O
GLU C:283 C:318 74.0 0.389 S -99.7 -1.7 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLU A:283 A:318 77.0 0.405 S -109.0 -5.1 27.0 0.142 0.263 A:P04181:0.263
 QRM
HOH
 8.517
2.519
 C
O
 O9
O
GLU B:283 B:318 82.0 0.432 S -106.6 -4.4 NA NA NA
GLU C:283 C:318 76.0 0.4 S -108.5 -5.0 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLU A:283 A:318 85.0 0.447 S -100.0 -3.0 34.0 0.179 0.268 B:P04181:0.268
 O78
HOH
 7.815
2.707
 C
OE2
 O9
O
GLU B:283 B:318 81.0 0.426 S -99.6 -5.6 31.0 0.163 0.263 A:P04181:0.263
 O78
HOH
 7.774
2.584
 C
O
 O8
O
GLU C:283 C:318 85.0 0.447 S -99.6 -10.7 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLU A:283 A:318 75.0 0.395 S -98.3 -1.1 24.0 0.126 0.269 A:P04181:0.268
 IF1
HOH
 8.061
2.684
 N
O
 O26
O
GLU B:283 B:318 80.0 0.421 S -99.4 -2.1 NA NA NA
GLU C:283 C:318 86.0 0.453 S -99.1 -0.0 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLU A:283 B:318 77.0 0.405 S -102.1 -7.5 32.0 0.168 0.237 B:P04181:0.237
 Y7S
HOH
 9.322
2.517
 N
O
 O19
O
GLU B:283 C:318 79.0 0.416 S -101.7 0.8 35.0 0.184 0.232 A:P04181:0.232
 Y7S
HOH
 8.121
2.678
 N
OE2
 O19
O
GLU C:283 E:318 73.0 0.384 S -103.9 -11.8 NA NA NA
GLU D:283 F:318 80.0 0.421 S -102.9 1.0 NA NA NA
GLU E:283 I:318 81.0 0.426 S -100.1 -2.5 NA NA NA
GLU F:283 J:318 83.0 0.437 S -99.4 -2.4 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLU A:283 A:318 78.0 0.411 S -95.5 -2.6 29.0 0.153 0.258 A:P04181:0.258
 HOH
 2.337
 OE2
 O
GLU B:283 B:318 70.0 0.368 S -99.2 -3.6 NA NA NA
GLU C:283 C:318 84.0 0.442 S -101.7 -6.8 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLU A:283 B:318 80.0 0.421 S -104.3 -1.4 31.0 0.163 0.258 A:P04181:0.258
 7QP
HOH
 7.544
2.694
 C
O
 O05
O
GLU B:283 A:318 81.0 0.426 S -108.5 -3.2 NA NA NA
GLU C:283 C:318 84.0 0.442 S -104.7 -1.4 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLU A:281 A:318 79.0 0.416 S -97.3 -8.7 32.0 0.168 0.248 B:P04181:0.247
 GBC
HOH
 8.196
2.657
 C
O
 O2
O
GLU B:281 B:318 79.0 0.416 S -97.0 -9.1 32.0 0.168 0.248 A:P04181:0.247
 GAB
HOH
 8.109
2.544
 C
O
 O1'
O
GLU C:281 C:318 80.0 0.421 S -96.5 -9.4 80.0 0.421 0.0 HOH
 2.691
 O
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLU A:281 A:318 81.0 0.426 S -86.8 0.3 35.0 0.184 0.242 B:P04181:0.242
 CAN
HOH
 7.162
2.833
 C
O
 OXT
O
GLU B:281 B:318 83.0 0.437 S -87.6 -0.1 37.0 0.195 0.242 A:P04181:0.242
 CAN
HOH
 6.765
2.676
 C
O
 OXT
O
GLU C:281 C:318 83.0 0.437 S -87.1 0.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLU A:318 A:318 80.0 0.421 S -90.7 -15.8