Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126091584 | . | C | A | CCDS7639.1:NM_000274.3:c.812aGa>aTa_NP_000265.1:p.271R>I | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | ARG | A:271 | A:271 | 0.0 | 0.0 | T | -54.6 | -40.3 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.702 3.493 |
CD N |
O3 O |
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| ARG | B:271 | B:271 | 0.0 | 0.0 | T | -51.3 | -41.3 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.667 3.386 |
CD N |
O3 O |
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| ARG | C:271 | C:271 | 0.0 | 0.0 | T | -51.3 | -37.8 | NA | NA | NA | |||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | ARG | A:271 | A:271 | 0.0 | 0.0 | T | -60.0 | -31.9 | NA | NA | NA | ||||||
| ARG | B:271 | B:271 | 0.0 | 0.0 | T | -54.4 | -41.3 | NA | NA | NA | |||||||||||||
| ARG | C:271 | C:271 | 0.0 | 0.0 | T | -56.1 | -39.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.326 |
CB |
O |
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| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | ARG | A:271 | A:271 | 0.0 | 0.0 | T | -57.7 | -44.0 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.402 8.515 |
CG NH2 |
O3 O |
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| ARG | B:271 | B:271 | 0.0 | 0.0 | T | -57.2 | -44.1 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.422 4.041 |
CG CB |
O3 O |
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| ARG | C:271 | C:271 | 0.0 | 0.0 | T | -57.0 | -44.1 | NA | NA | NA | |||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | ARG | A:271 | A:271 | 0.0 | 0.0 | T | -56.2 | -41.1 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.646 3.359 |
CG N |
O3 O |
||
| ARG | B:271 | B:271 | 0.0 | 0.0 | T | -52.4 | -48.8 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.545 3.522 |
CG CB |
O3 O |
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| ARG | C:271 | C:271 | 0.0 | 0.0 | T | -57.0 | -44.2 | NA | NA | NA | |||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | ARG | A:247 | A:271 | 0.0 | 0.0 | T | -50.1 | -46.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.271 |
N |
O |
||
| ARG | B:247 | B:271 | 0.0 | 0.0 | T | -58.3 | -41.1 | NA | NA | NA | |||||||||||||
| ARG | C:247 | C:271 | 0.0 | 0.0 | T | -51.6 | -44.0 | NA | NA | NA | |||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -56.7 | -37.0 | 0.0 | 0.0 | 0.0 |
9QJ HOH |
9.764 3.312 |
CG N |
O3 O |
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| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -53.7 | -40.5 | 0.0 | 0.0 | 0.0 |
9QJ HOH |
9.719 3.442 |
CG N |
O3 O |
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| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -55.6 | -36.8 | 0.0 | 0.0 | 0.0 |
9QJ HOH |
9.825 3.407 |
CG N |
O3 O |
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| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -59.1 | -41.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.279 |
N |
O |
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| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -55.7 | -42.4 | 0.0 | 0.0 | 0.0 |
MQ4 HOH |
8.564 3.342 |
CG CB |
O6 O |
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| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -56.6 | -40.4 | NA | NA | NA | |||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -64.3 | -40.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.061 |
N |
O |
||
| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -61.8 | -40.5 | NA | NA | NA | |||||||||||||
| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -64.1 | -40.4 | NA | NA | NA | |||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -56.4 | -40.7 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.701 3.309 |
CG N |
O3 O |
||
| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -60.0 | -38.6 | 0.0 | 0.0 | 0.0 |
PLP HOH |
9.645 3.302 |
CG N |
O3 O |
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| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -62.1 | -36.3 | NA | NA | NA | |||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -55.8 | -39.5 | 0.0 | 0.0 | 0.0 |
IF1 HOH |
9.157 3.286 |
CG N |
F31 O |
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| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -59.5 | -39.6 | NA | NA | NA | |||||||||||||
| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -53.4 | -42.3 | NA | NA | NA | |||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:236 | B:271 | 0.0 | 0.0 | T | -56.0 | -43.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.281 |
N |
O |
||
| ARG | B:236 | C:271 | 0.0 | 0.0 | T | -58.9 | -43.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.275 |
N |
O |
|||||||||
| ARG | C:236 | E:271 | 0.0 | 0.0 | T | -57.8 | -41.3 | NA | NA | NA | |||||||||||||
| ARG | D:236 | F:271 | 0.0 | 0.0 | T | -58.9 | -40.5 | NA | NA | NA | |||||||||||||
| ARG | E:236 | I:271 | 0.0 | 0.0 | T | -58.9 | -41.4 | NA | NA | NA | |||||||||||||
| ARG | F:236 | J:271 | 0.0 | 0.0 | T | -60.8 | -40.9 | NA | NA | NA | |||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:236 | A:271 | 0.0 | 0.0 | T | -67.6 | -35.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.060 |
N |
O |
||
| ARG | B:236 | B:271 | 0.0 | 0.0 | T | -63.4 | -45.2 | NA | NA | NA | |||||||||||||
| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -60.0 | -44.4 | NA | NA | NA | |||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ARG | A:236 | B:271 | 0.0 | 0.0 | T | -59.3 | -40.8 | 0.0 | 0.0 | 0.0 |
HOH |
3.347 |
N |
O |
||
| ARG | B:236 | A:271 | 0.0 | 0.0 | T | -60.1 | -40.6 | NA | NA | NA | |||||||||||||
| ARG | C:236 | C:271 | 0.0 | 0.0 | T | -59.6 | -41.2 | NA | NA | NA | |||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ARG | A:234 | A:271 | 0.0 | 0.0 | T | -46.7 | -46.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.431 |
H |
O |
||
| ARG | B:234 | B:271 | 0.0 | 0.0 | T | -46.8 | -46.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.300 |
CB |
O |
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| ARG | C:234 | C:271 | 0.0 | 0.0 | T | -46.5 | -47.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.272 |
N |
O |
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| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ARG | A:234 | A:271 | 0.0 | 0.0 | T | -47.6 | -47.3 | 0.0 | 0.0 | 0.0 |
HOH |
3.044 |
H |
O |
||
| ARG | B:234 | B:271 | 0.0 | 0.0 | T | -47.5 | -47.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.501 |
CB |
O |
|||||||||
| ARG | C:234 | C:271 | 0.0 | 0.0 | T | -47.5 | -47.4 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | ARG | A:271 | A:271 | 0.0 | 0.0 | T | -53.6 | -43.9 | |