Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126091596 . G A CCDS7639.1:NM_000274.3:c.800aCa>aTa_NP_000265.1:p.267T>I Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 THR A:267 A:267 2.0 0.014 T -85.7 -20.3 2.0 0.014 0.0 PLP
HOH
 5.968
2.607
 N
O
 C2A
O
THR B:267 B:267 2.0 0.014 T -84.8 -22.7 2.0 0.014 0.0 PLP
HOH
 5.940
2.602
 N
O
 C2A
O
THR C:267 C:267 2.0 0.014 T -83.5 -20.5 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 THR A:267 A:267 3.0 0.021 T -80.4 -22.1 NA NA NA
THR B:267 B:267 3.0 0.021 T -80.3 -20.5 NA NA NA
THR C:267 C:267 3.0 0.021 T -83.5 -18.9 3.0 0.021 0.0 PFM
PFM
HOH
 6.093
6.093
2.719
 N
N
O
 C2A
C2A
O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 THR A:267 A:267 2.0 0.014 T -81.2 -13.6 2.0 0.014 0.0 PLP
 5.675
 N
 C2A
THR B:267 B:267 2.0 0.014 T -81.6 -13.4 2.0 0.014 0.0 PLP
HOH
 5.838
3.024
 N
N
 C2A
O
THR C:267 C:267 3.0 0.021 T -82.1 -13.0 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 THR A:267 A:267 3.0 0.021 T -87.3 -20.0 3.0 0.021 0.0 PLP
HOH
 6.021
2.619
 N
O
 C2A
O
THR B:267 B:267 2.0 0.014 T -86.8 -18.2 2.0 0.014 0.0 PLP
HOH
 5.879
2.566
 N
O
 C2A
O
THR C:267 C:267 3.0 0.021 T -86.8 -17.5 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 THR A:243 A:267 3.0 0.021 T -81.4 -16.5 3.0 0.021 0.0 PLP
HOH
 5.768
2.630
 N
O
 C2A
O
THR B:243 B:267 3.0 0.021 T -84.8 -17.1 NA NA NA
THR C:243 C:267 1.0 0.007 T -84.3 -19.8 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 THR A:232 A:267 3.0 0.021 T -87.0 -18.5 3.0 0.021 0.0 9QJ
HOH
 5.701
2.564
 N
O
 C2A
O
THR B:232 B:267 3.0 0.021 T -85.7 -17.2 3.0 0.021 0.0 9QJ
HOH
 5.671
2.550
 N
O
 C2A
O
THR C:232 C:267 3.0 0.021 T -84.6 -13.5 3.0 0.021 0.0 9QJ
HOH
 5.617
2.744
 N
O
 C2A
O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 THR A:232 A:267 2.0 0.014 T -85.8 -17.1 2.0 0.014 0.0 PLP
HOH
 5.908
2.693
 N
O
 C2A
O
THR B:232 B:267 2.0 0.014 T -87.1 -16.1 2.0 0.014 0.0 PLP
MQ4
HOH
 5.961
6.725
2.478
 N
N
O
 C2A
O6
O
THR C:232 C:267 1.0 0.007 T -86.8 -14.7 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 THR A:232 A:267 2.0 0.014 T -90.4 -20.0 2.0 0.014 0.0 PLP
QRM
HOH
 5.929
8.701
2.622
 N
N
O
 C2A
N10
O
THR B:232 B:267 1.0 0.007 T -87.8 -19.2 NA NA NA
THR C:232 C:267 2.0 0.014 T -91.1 -19.4 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 THR A:232 A:267 2.0 0.014 T -84.6 -17.3 2.0 0.014 0.0 PLP
O78
HOH
 5.695
9.380
2.499
 N
N
O
 C2A
C5
O
THR B:232 B:267 2.0 0.014 T -85.1 -16.8 2.0 0.014 0.0 PLP
O78
HOH
 5.642
9.516
2.661
 N
N
O
 C2A
C5
O
THR C:232 C:267 2.0 0.014 T -87.2 -24.4 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 THR A:232 A:267 4.0 0.029 T -85.7 -11.2 4.0 0.029 0.0 IF1
HOH
 5.930
2.567
 N
O
 C11
O
THR B:232 B:267 2.0 0.014 T -88.5 -13.9 NA NA NA
THR C:232 C:267 1.0 0.007 T -86.0 -12.3 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 THR A:232 B:267 2.0 0.014 T -91.2 -16.4 2.0 0.014 0.0 Y7S
HOH
 5.931
2.528
 N
O
 C16
O
THR B:232 C:267 2.0 0.014 T -90.4 -16.5 2.0 0.014 0.0 Y7S
HOH
 6.046
2.595
 N
O
 C16
O
THR C:232 E:267 1.0 0.007 T -89.7 -15.4 NA NA NA
THR D:232 F:267 2.0 0.014 T -90.0 -17.1 NA NA NA
THR E:232 I:267 2.0 0.014 T -87.9 -15.5 NA NA NA
THR F:232 J:267 1.0 0.007 T -89.3 -12.6 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 THR A:232 A:267 2.0 0.014 T -87.2 -13.1 2.0 0.014 0.0 Y8P
HOH
 5.924
2.671
 N
O
 C20
O
THR B:232 B:267 2.0 0.014 T -88.8 -20.8 NA NA NA
THR C:232 C:267 2.0 0.014 T -91.6 -17.4 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 THR A:232 B:267 2.0 0.014 T -85.2 -20.7 2.0 0.014 0.0 7QP
HOH
 5.811
2.524
 N
O
 C20
O
THR B:232 A:267 2.0 0.014 T -85.0 -20.5 NA NA NA
THR C:232 C:267 3.0 0.021 T -84.0 -21.5 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 THR A:230 A:267 3.0 0.021 T -90.0 -18.7 3.0 0.021 0.0 GAB
PLP
HOH
 8.888
5.288
2.127
 H
H
H
 N3
C2A
O
THR B:230 B:267 3.0 0.021 T -90.1 -19.4 3.0 0.021 0.0 GBC
PLP
HOH
 8.772
5.163
2.172
 H
H
H
 N3
C2A
O
THR C:230 C:267 3.0 0.021 T -90.0 -18.7 3.0 0.021 0.0 GBC
PLP
HOH
 8.720
5.314
2.114
 H
H
H
 N3
C2A
O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 THR A:230 A:267 2.0 0.014 T -90.7 -22.0 2.0 0.014 0.0 CAN
PLP
HOH
 9.192
5.112
2.249
 H
H
H
 NZ
C2A
O
THR B:230 B:267 3.0 0.021 T -89.9 -21.7 3.0 0.021 0.0 CAN
PLP
HOH
 8.618
5.052
2.362
 H
H
H
 NZ
C2A
O
THR C:230 C:267 3.0 0.021 T -90.1 -21.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 THR A:267 A:267 1.0 0.007 T -94.0 -22.2