Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126092379 . G A CCDS7639.1:NM_000274.3:c.759tgC>tgT_NP_000265.1:p.253C>C Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 CYS A:253 A:253 0.0 0.0 H -65.0 -46.1 0.0 0.0 0.0 HOH
 3.681
 O
 O
CYS B:253 B:253 0.0 0.0 H -68.5 -43.8 0.0 0.0 0.0 HOH
 4.011
 O
 O
CYS C:253 C:253 0.0 0.0 H -65.4 -46.9 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 CYS A:253 A:253 0.0 0.0 H -59.6 -46.2 NA NA NA
CYS B:253 B:253 0.0 0.0 H -61.4 -45.0 NA NA NA
CYS C:253 C:253 0.0 0.0 H -61.7 -45.2 0.0 0.0 0.0 HOH
 3.122
 O
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 CYS A:253 A:253 0.0 0.0 H -63.2 -52.2 0.0 0.0 0.0
CYS B:253 B:253 0.0 0.0 H -61.6 -53.8 0.0 0.0 0.0 HOH
 8.736
 O
 O
CYS C:253 C:253 0.0 0.0 H -63.1 -53.1 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 CYS A:253 A:253 0.0 0.0 H -61.4 -45.2 0.0 0.0 0.0 HOH
 3.491
 O
 O
CYS B:253 B:253 0.0 0.0 H -61.1 -46.0 0.0 0.0 0.0 HOH
 3.348
 O
 O
CYS C:253 C:253 0.0 0.0 H -65.0 -44.7 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 CYS A:229 A:253 0.0 0.0 H -63.2 -45.6 0.0 0.0 0.0 HOH
 3.251
 O
 O
CYS B:229 B:253 0.0 0.0 H -62.2 -46.1 NA NA NA
CYS C:229 C:253 0.0 0.0 H -63.5 -44.2 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 CYS A:218 A:253 0.0 0.0 H -62.2 -45.6 0.0 0.0 0.0 HOH
 3.514
 O
 O
CYS B:218 B:253 0.0 0.0 H -65.9 -42.4 0.0 0.0 0.0 HOH
 3.293
 O
 O
CYS C:218 C:253 0.0 0.0 H -64.2 -44.1 0.0 0.0 0.0 HOH
 3.453
 O
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 CYS A:218 A:253 0.0 0.0 H -62.5 -43.4 0.0 0.0 0.0 HOH
 3.409
 O
 O
CYS B:218 B:253 0.0 0.0 H -63.6 -44.9 0.0 0.0 0.0 HOH
 3.392
 O
 O
CYS C:218 C:253 0.0 0.0 H -64.8 -41.0 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 CYS A:218 A:253 0.0 0.0 H -63.3 -43.1 0.0 0.0 0.0 HOH
 3.329
 O
 O
CYS B:218 B:253 0.0 0.0 H -65.7 -45.1 NA NA NA
CYS C:218 C:253 0.0 0.0 H -62.2 -42.6 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 CYS A:218 A:253 0.0 0.0 H -58.3 -45.7 0.0 0.0 0.0 HOH
 3.365
 O
 O
CYS B:218 B:253 0.0 0.0 H -60.7 -45.5 0.0 0.0 0.0 HOH
 6.572
 C
 O
CYS C:218 C:253 0.0 0.0 H -59.2 -43.9 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 CYS A:218 A:253 0.0 0.0 H -67.6 -41.4 0.0 0.0 0.0 HOH
 3.461
 O
 O
CYS B:218 B:253 0.0 0.0 H -66.7 -40.4 NA NA NA
CYS C:218 C:253 0.0 0.0 H -62.2 -41.5 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:218 B:253 0.0 0.0 H -65.6 -40.5 0.0 0.0 0.0 HOH
 3.306
 O
 O
CYS B:218 C:253 0.0 0.0 H -63.6 -41.8 0.0 0.0 0.0 HOH
 3.361
 O
 O
CYS C:218 E:253 0.0 0.0 H -65.5 -41.3 NA NA NA
CYS D:218 F:253 0.0 0.0 H -63.0 -42.5 NA NA NA
CYS E:218 I:253 0.0 0.0 H -63.3 -44.0 NA NA NA
CYS F:218 J:253 0.0 0.0 H -63.2 -45.0 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:218 A:253 0.0 0.0 H -68.0 -46.3 0.0 0.0 0.0 HOH
 3.314
 O
 O
CYS B:218 B:253 0.0 0.0 H -66.1 -37.4 NA NA NA
CYS C:218 C:253 0.0 0.0 H -67.7 -41.8 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:218 B:253 0.0 0.0 H -64.2 -40.8 0.0 0.0 0.0 HOH
 3.437
 O
 O
CYS B:218 A:253 0.0 0.0 H -65.0 -41.0 NA NA NA
CYS C:218 C:253 0.0 0.0 H -66.7 -40.7 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 CYS A:216 A:253 0.0 0.0 H -61.9 -44.6 0.0 0.0 0.0 HOH
 4.301
 O
 O
CYS B:216 B:253 0.0 0.0 H -61.9 -45.3 0.0 0.0 0.0 HOH
 3.377
 O
 O
CYS C:216 C:253 0.0 0.0 H -62.4 -45.6 0.0 0.0 0.0 HOH
 3.728
 O
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 CYS A:216 A:253 0.0 0.0 H -60.9 -49.6 0.0 0.0 0.0 HOH
 4.542
 O
 O
CYS B:216 B:253 0.0 0.0 H -61.2 -49.2 0.0 0.0 0.0 HOH
 3.992
 O
 O
CYS C:216 C:253 0.0 0.0 H -59.1 -50.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 CYS A:253 A:253 0.0 0.0 H -59.9 -44.4