Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126092398 . A C CCDS7639.1:NM_000274.3:c.740aTg>aGg_NP_000265.1:p.247M>R Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 MET A:247 A:247 106.0 0.573 H -71.3 -42.5 106.0 0.573 0.0 HOH
 2.942
 CE
 O
MET B:247 B:247 106.0 0.573 H -68.7 -46.0 106.0 0.573 0.0 HOH
 4.273
 O
 O
MET C:247 C:247 105.0 0.568 H -68.2 -44.0 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 MET A:247 A:247 106.0 0.573 H -66.2 -38.7 NA NA NA
MET B:247 B:247 97.0 0.524 H -63.1 -40.7 NA NA NA
MET C:247 C:247 99.0 0.535 H -59.7 -44.8 99.0 0.535 0.0 HOH
 2.834
 O
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 MET A:247 A:247 94.0 0.508 H -72.3 -40.4 94.0 0.508 0.0
MET B:247 B:247 95.0 0.514 H -74.2 -39.5 95.0 0.514 0.0 HOH
 8.656
 N
 O
MET C:247 C:247 96.0 0.519 H -73.5 -39.8 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 MET A:247 A:247 108.0 0.584 H -62.7 -44.0 108.0 0.584 0.0 HOH
 3.490
 CG
 O
MET B:247 B:247 107.0 0.578 H -60.3 -41.4 107.0 0.578 0.0 HOH
 4.200
 CB
 O
MET C:247 C:247 103.0 0.557 H -60.2 -44.3 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 MET A:223 A:247 112.0 0.605 H -60.3 -41.8 112.0 0.605 0.0 HOH
 2.938
 O
 O
MET B:223 B:247 111.0 0.6 H -54.7 -42.0 NA NA NA
MET C:223 C:247 103.0 0.557 H -58.8 -41.8 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 MET A:212 A:247 110.0 0.595 H -61.1 -42.7 110.0 0.595 0.0 HOH
 3.353
 CE
 O
MET B:212 B:247 99.0 0.535 H -61.2 -45.3 99.0 0.535 0.0 HOH
 2.819
 O
 O
MET C:212 C:247 96.0 0.519 H -57.9 -41.0 96.0 0.519 0.0 HOH
 2.752
 O
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 MET A:212 A:247 102.0 0.551 H -56.2 -45.1 102.0 0.551 0.0 HOH
 3.138
 CG
 O
MET B:212 B:247 114.0 0.616 H -59.9 -45.1 114.0 0.616 0.0 HOH
 4.119
 CB
 O
MET C:212 C:247 91.0 0.492 H -60.5 -42.2 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 MET A:212 A:247 98.0 0.53 H -58.9 -44.6 98.0 0.53 0.0 HOH
 2.738
 O
 O
MET B:212 B:247 98.0 0.53 H -59.8 -43.9 NA NA NA
MET C:212 C:247 100.0 0.541 H -58.3 -44.3 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 MET A:212 A:247 111.0 0.6 H -64.1 -39.4 111.0 0.6 0.0 HOH
 4.686
 CB
 O
MET B:212 B:247 109.0 0.589 H -67.9 -39.2 109.0 0.589 0.0 HOH
 3.036
 O
 O
MET C:212 C:247 95.0 0.514 H -66.0 -38.1 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 MET A:212 A:247 105.0 0.568 H -62.3 -40.5 105.0 0.568 0.0 HOH
 2.775
 O
 O
MET B:212 B:247 101.0 0.546 H -56.2 -46.4 NA NA NA
MET C:212 C:247 106.0 0.573 H -62.8 -43.2 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 MET A:212 B:247 114.0 0.616 H -60.1 -41.8 114.0 0.616 0.0 HOH
 3.339
 O
 O
MET B:212 C:247 111.0 0.6 H -58.9 -44.1 111.0 0.6 0.0 HOH
 3.355
 CG
 O
MET C:212 E:247 100.0 0.541 H -64.3 -41.4 NA NA NA
MET D:212 F:247 103.0 0.557 H -58.5 -46.4 NA NA NA
MET E:212 I:247 98.0 0.53 H -60.0 -44.9 NA NA NA
MET F:212 J:247 110.0 0.595 H -58.2 -45.3 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 MET A:212 A:247 83.0 0.449 H -60.2 -42.5 83.0 0.449 0.0 HOH
 5.596
 N
 O
MET B:212 B:247 111.0 0.6 H -61.4 -45.7 NA NA NA
MET C:212 C:247 108.0 0.584 H -73.3 -24.9 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 MET A:212 B:247 109.0 0.589 H -59.9 -43.9 109.0 0.589 0.0 HOH
 2.741
 O
 O
MET B:212 A:247 112.0 0.605 H -58.0 -43.6 NA NA NA
MET C:212 C:247 114.0 0.616 H -57.4 -42.5 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 MET A:210 A:247 114.0 0.616 H -67.0 -40.4 114.0 0.616 0.0 HOH
 4.661
 SD
 O
MET B:210 B:247 114.0 0.616 H -67.9 -40.1 114.0 0.616 0.0 HOH
 3.799
 CB
 O
MET C:210 C:247 113.0 0.611 H -67.4 -40.3 113.0 0.611 0.0 HOH
 4.986
 H
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 MET A:210 A:247 116.0 0.627 H -65.3 -38.7 116.0 0.627 0.0 HOH
 3.509
 CG
 O
MET B:210 B:247 115.0 0.622 H -65.2 -38.6 115.0 0.622 0.0 HOH
 4.397
 CB
 O
MET C:210 C:247 115.0 0.622 H -66.3 -38.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 MET A:247 A:247 114.0 0.616 H -61.8 -45.6