Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126092441 . G A CCDS7639.1:NM_000274.3:c.697Cag>Tag_NP_000265.1:p.233Q>* Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLN A:233 A:233 7.0 0.039 B -83.2 105.8 7.0 0.039 0.0 PLP
HOH
 7.082
2.555
 CA
OE1
 C2A
O
GLN B:233 B:233 7.0 0.039 B -86.0 108.2 7.0 0.039 0.0 PLP
HOH
 7.022
2.804
 CA
OE1
 C2A
O
GLN C:233 C:233 7.0 0.039 B -81.3 111.5 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLN A:233 A:233 6.0 0.033 B -76.6 120.9 NA NA NA
GLN B:233 B:233 7.0 0.039 B -77.3 122.3 NA NA NA
GLN C:233 C:233 6.0 0.033 B -77.3 121.7 6.0 0.033 0.0 PFM
PFM
HOH
 6.726
6.726
2.591
 C
C
OE1
 C2A
C2A
O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLN A:233 A:233 7.0 0.039 B -75.9 115.0 7.0 0.039 0.0 PLP
HOH
 6.773
6.410
 CA
NE2
 C2A
O
GLN B:233 B:233 6.0 0.033 B -75.0 115.0 6.0 0.033 0.0 PLP
HOH
 6.906
3.453
 CA
CB
 C2A
O
GLN C:233 C:233 6.0 0.033 B -74.9 114.9 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLN A:233 A:233 6.0 0.033 B -86.1 113.1 6.0 0.033 0.0 PLP
HOH
 6.889
3.038
 CA
OE1
 C2A
O
GLN B:233 B:233 6.0 0.033 B -81.3 106.9 6.0 0.033 0.0 PLP
HOH
 6.995
2.630
 CA
OE1
 C2A
O
GLN C:233 C:233 7.0 0.039 B -82.3 111.9 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLN A:209 A:233 6.0 0.033 B -82.7 117.6 6.0 0.033 0.0 PLP
HOH
 6.751
2.964
 CA
OE1
 C2A
O
GLN B:209 B:233 6.0 0.033 B -82.7 119.3 NA NA NA
GLN C:209 C:233 6.0 0.033 B -79.8 116.0 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLN A:198 A:233 7.0 0.039 B -83.1 113.1 7.0 0.039 0.0 9QJ
HOH
 7.049
2.776
 C
OE1
 C2A
O
GLN B:198 B:233 7.0 0.039 B -82.9 114.7 7.0 0.039 0.0 9QJ
HOH
 7.079
2.603
 CA
OE1
 C2A
O
GLN C:198 C:233 6.0 0.033 B -79.7 108.8 6.0 0.033 0.0 9QJ
HOH
 7.123
2.559
 CA
OE1
 C2A
O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLN A:198 A:233 5.0 0.028 B -81.2 109.4 5.0 0.028 0.0 PLP
HOH
 7.127
2.816
 CA
OE1
 C2A
O
GLN B:198 B:233 7.0 0.039 B -84.5 107.4 7.0 0.039 0.0 PLP
GOL
MQ4
HOH
 7.104
9.479
6.841
2.622
 CA
NE2
C
OE1
 C2A
O2
F1
O
GLN C:198 C:233 7.0 0.039 B -84.2 108.1 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLN A:198 A:233 5.0 0.028 B -77.1 118.4 5.0 0.028 0.0 PLP
QRM
HOH
 6.766
9.379
2.642
 C
C
OE1
 C2A
N10
O
GLN B:198 B:233 6.0 0.033 B -75.5 119.4 NA NA NA
GLN C:198 C:233 6.0 0.033 B -76.7 118.3 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLN A:198 A:233 6.0 0.033 B -75.1 116.1 6.0 0.033 0.0 PLP
O78
HOH
 6.932
9.431
2.893
 C
C
OE1
 C2A
C5
O
GLN B:198 B:233 6.0 0.033 B -76.7 114.2 6.0 0.033 0.0 PLP
O78
HOH
 6.928
9.363
2.738
 C
C
OE1
 C2A
N10
O
GLN C:198 C:233 6.0 0.033 B -83.4 112.3 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLN A:198 A:233 7.0 0.039 B -79.1 107.3 7.0 0.039 0.0 IF1
HOH
 6.909
2.690
 C
OE1
 F32
O
GLN B:198 B:233 6.0 0.033 B -85.1 112.6 NA NA NA
GLN C:198 C:233 7.0 0.039 B -85.1 110.0 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:198 B:233 7.0 0.039 B -80.4 106.3 7.0 0.039 0.0 Y7S
HOH
 6.962
2.491
 CA
OE1
 C16
O
GLN B:198 C:233 6.0 0.033 B -80.1 107.5 6.0 0.033 0.0 Y7S
HOH
 6.762
2.945
 CA
OE1
 C16
O
GLN C:198 E:233 6.0 0.033 B -80.3 107.3 NA NA NA
GLN D:198 F:233 6.0 0.033 B -81.9 109.9 NA NA NA
GLN E:198 I:233 7.0 0.039 B -78.9 111.1 NA NA NA
GLN F:198 J:233 6.0 0.033 B -82.2 110.2 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:198 A:233 7.0 0.039 B -77.4 103.1 7.0 0.039 0.0 Y8P
HOH
 6.944
2.591
 CA
OE1
 C20
O
GLN B:198 B:233 7.0 0.039 B -80.0 105.5 NA NA NA
GLN C:198 C:233 7.0 0.039 B -80.0 99.9 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:198 B:233 5.0 0.028 B -84.6 111.7 5.0 0.028 0.0 7QP
HOH
 6.635
2.814
 CA
OE1
 C20
O
GLN B:198 A:233 5.0 0.028 B -84.4 111.5 NA NA NA
GLN C:198 C:233 5.0 0.028 B -86.4 111.8 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLN A:196 A:233 8.0 0.044 B -80.4 110.9 8.0 0.044 0.0 GAB
PLP
HOH
 9.427
6.715
2.168
 C
CA
HE22
 C4
C2A
O
GLN B:196 B:233 8.0 0.044 B -80.6 110.7 8.0 0.044 0.0 GBC
PLP
HOH
 9.351
6.839
2.010
 C
CA
HE22
 C4
C2A
O
GLN C:196 C:233 7.0 0.039 B -80.3 111.0 7.0 0.039 0.0 GBC
PLP
HOH
 9.180
6.774
2.139
 C
CA
HE22
 C4
C2A
O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLN A:196 A:233 8.0 0.044 B -81.1 106.3 8.0 0.044 0.0 CAN
PLP
HOH
 9.355
6.845
2.071
 C
CA
HE22
 NZ
C2A
O
GLN B:196 B:233 7.0 0.039 B -80.7 105.9 7.0 0.039 0.0 CAN
PLP
HOH
 9.556
6.837
2.235
 C
CA
HE22
 NZ
C2A
O
GLN C:196 C:233 8.0 0.044 B -80.8 105.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLN A:233 A:233 7.0 0.039 B -71.6 106.1