Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126094103 . C A CCDS7639.1:NM_000274.3:c.550Gct>Tct_NP_000265.1:p.184A>S Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 ALA A:184 A:184 3.0 0.026 H -66.3 -35.8 3.0 0.026 0.0 PLP
HOH
 7.676
2.635
 CB
O
 C5A
O
ALA B:184 B:184 3.0 0.026 H -67.2 -36.6 3.0 0.026 0.0 PLP
HOH
 7.572
2.901
 CB
O
 C5A
O
ALA C:184 C:184 3.0 0.026 H -69.7 -36.0 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 ALA A:184 A:184 2.0 0.017 H -63.6 -40.1 NA NA NA
ALA B:184 B:184 2.0 0.017 H -61.7 -40.3 NA NA NA
ALA C:184 C:184 2.0 0.017 H -64.0 -40.5 2.0 0.017 0.0 PFM
PFM
HOH
 7.344
7.344
2.765
 CB
CB
O
 C5A
C5A
O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 ALA A:184 A:184 2.0 0.017 H -61.6 -44.3 2.0 0.017 0.0 PLP
HOH
 7.783
6.088
 CB
O
 C6
O
ALA B:184 B:184 2.0 0.017 H -60.8 -44.9 2.0 0.017 0.0 PLP
HOH
 7.709
5.565
 CB
O
 C6
O
ALA C:184 C:184 2.0 0.017 H -62.8 -43.3 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 ALA A:184 A:184 2.0 0.017 H -62.3 -43.3 2.0 0.017 0.0 PLP
HOH
 7.728
2.891
 CB
O
 C6
O
ALA B:184 B:184 3.0 0.026 H -60.4 -44.9 3.0 0.026 0.0 PLP
HOH
 7.817
2.740
 CB
O
 C6
O
ALA C:184 C:184 3.0 0.026 H -63.8 -42.6 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 ALA A:160 A:184 2.0 0.017 H -67.5 -38.0 2.0 0.017 0.0 PLP
HOH
 7.512
2.826
 CB
O
 C5A
O
ALA B:160 B:184 2.0 0.017 H -67.0 -39.9 NA NA NA
ALA C:160 C:184 2.0 0.017 H -68.1 -40.7 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 ALA A:149 A:184 3.0 0.026 H -63.8 -44.9 3.0 0.026 0.0 9QJ
HOH
 6.668
2.886
 CB
O
 O2F
O
ALA B:149 B:184 3.0 0.026 H -56.8 -46.8 3.0 0.026 0.0 9QJ
HOH
 6.738
2.834
 CB
O
 O1F
O
ALA C:149 C:184 2.0 0.017 H -60.9 -46.4 2.0 0.017 0.0 9QJ
HOH
 6.542
2.808
 CB
O
 O2F
O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 ALA A:149 A:184 3.0 0.026 H -63.1 -41.4 3.0 0.026 0.0 PLP
HOH
 7.569
2.697
 CB
O
 C5A
O
ALA B:149 B:184 2.0 0.017 H -63.8 -40.2 2.0 0.017 0.0 PLP
MQ4
HOH
 7.404
9.485
2.753
 CB
CB
O
 C5A
N10
O
ALA C:149 C:184 3.0 0.026 H -63.7 -38.7 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ALA A:149 A:184 2.0 0.017 H -65.4 -40.5 2.0 0.017 0.0 PLP
HOH
 7.385
2.706
 CB
O
 C5A
O
ALA B:149 B:184 2.0 0.017 H -66.7 -39.1 NA NA NA
ALA C:149 C:184 2.0 0.017 H -65.8 -40.7 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 ALA A:149 A:184 2.0 0.017 H -62.2 -41.3 2.0 0.017 0.0 PLP
O78
HOH
 7.679
7.472
3.118
 CB
CB
O
 C5A
N10
O
ALA B:149 B:184 3.0 0.026 H -64.3 -42.4 3.0 0.026 0.0 PLP
O78
HOH
 7.656
7.615
2.816
 CB
CB
O
 C5A
N10
O
ALA C:149 C:184 2.0 0.017 H -63.9 -42.9 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 ALA A:149 A:184 2.0 0.017 H -63.3 -41.5 2.0 0.017 0.0 IF1
VLS
HOH
 7.360
7.911
2.827
 CB
O
O
 C12
O05
O
ALA B:149 B:184 2.0 0.017 H -59.7 -39.7 NA NA NA
ALA C:149 C:184 2.0 0.017 H -60.7 -37.4 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:149 B:184 2.0 0.017 H -63.1 -40.4 2.0 0.017 0.0 Y7S
HOH
 7.293
2.724
 CB
O
 C14
O
ALA B:149 C:184 2.0 0.017 H -62.9 -43.8 2.0 0.017 0.0 Y7S
HOH
 7.233
2.776
 CB
O
 C14
O
ALA C:149 E:184 2.0 0.017 H -63.9 -41.9 NA NA NA
ALA D:149 F:184 3.0 0.026 H -64.8 -42.4 NA NA NA
ALA E:149 I:184 2.0 0.017 H -56.8 -44.5 NA NA NA
ALA F:149 J:184 2.0 0.017 H -57.5 -43.1 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:149 A:184 1.0 0.009 H -58.0 -48.0 1.0 0.009 0.0 Y8P
HOH
 7.358
2.906
 CB
O
 C18
O
ALA B:149 B:184 3.0 0.026 H -65.5 -48.3 NA NA NA
ALA C:149 C:184 3.0 0.026 H -56.9 -44.0 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 ALA A:149 B:184 2.0 0.017 H -64.1 -37.8 2.0 0.017 0.0 7QP
HOH
 7.574
2.653
 CB
O
 C18
O
ALA B:149 A:184 2.0 0.017 H -63.9 -38.4 NA NA NA
ALA C:149 C:184 3.0 0.026 H -64.9 -38.9 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ALA A:147 A:184 3.0 0.026 H -63.2 -45.4 3.0 0.026 0.0 PLP
HOH
 7.541
2.941
 CB
O
 C5A
O
ALA B:147 B:184 3.0 0.026 H -61.8 -46.1 3.0 0.026 0.0 PLP
HOH
 7.493
2.807
 CB
O
 C5A
O
ALA C:147 C:184 3.0 0.026 H -62.3 -45.9 3.0 0.026 0.0 PLP
HOH
 7.449
2.973
 CB
O
 C5A
O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 ALA A:147 A:184 3.0 0.026 H -62.2 -40.9 3.0 0.026 0.0 CAN
PLP
HOH
 8.831
7.522
2.409
 CB
CB
O
 O
C5A
O
ALA B:147 B:184 3.0 0.026 H -61.8 -40.4 3.0 0.026 0.0 CAN
PLP
HOH
 8.879
7.380
2.793
 CB
CB
O
 O
C5A
O
ALA C:147 C:184 2.0 0.017 H -63.3 -40.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 ALA A:184 A:184 2.0 0.017 H -58.7 -49.2