Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126097153 | . | C | A | CCDS7639.1:NM_000274.3:c.478Gtg>Ttg_NP_000265.1:p.160V>L | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | VAL | A:160 | A:160 | 77.0 | 0.497 | I | -102.0 | -54.9 | 77.0 | 0.497 | 0.0 |
HOH |
3.391 |
CG2 |
O |
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| VAL | B:160 | B:160 | 78.0 | 0.503 | I | -110.9 | -53.6 | 78.0 | 0.503 | 0.0 |
HOH |
4.166 |
CG2 |
O |
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| VAL | C:160 | C:160 | 80.0 | 0.516 | I | -101.6 | -57.3 | NA | NA | NA | |||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | VAL | A:160 | A:160 | 74.0 | 0.477 | I | -113.5 | -45.3 | NA | NA | NA | ||||||
| VAL | B:160 | B:160 | 75.0 | 0.484 | I | -118.4 | -56.9 | NA | NA | NA | |||||||||||||
| VAL | C:160 | C:160 | 77.0 | 0.497 | I | -111.4 | -52.4 | 77.0 | 0.497 | 0.0 |
HOH |
3.425 |
CG2 |
O |
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| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | VAL | A:160 | A:160 | 77.0 | 0.497 | I | -116.0 | -56.4 | 77.0 | 0.497 | 0.0 |
HOH |
3.628 |
CG2 |
O |
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| VAL | B:160 | B:160 | 76.0 | 0.49 | I | -117.0 | -56.2 | 76.0 | 0.49 | 0.0 | |||||||||||||
| VAL | C:160 | C:160 | 76.0 | 0.49 | I | -117.2 | -54.8 | NA | NA | NA | |||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | VAL | A:160 | A:160 | 76.0 | 0.49 | I | -105.9 | -53.1 | 76.0 | 0.49 | 0.0 |
HOH |
3.560 |
CG2 |
O |
||
| VAL | B:160 | B:160 | 78.0 | 0.503 | I | -116.7 | -62.5 | 78.0 | 0.503 | 0.0 |
HOH |
3.273 |
O |
O |
|||||||||
| VAL | C:160 | C:160 | 77.0 | 0.497 | I | -107.4 | -51.7 | NA | NA | NA | |||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | VAL | A:136 | A:160 | 85.0 | 0.548 | I | -113.6 | -51.6 | 85.0 | 0.548 | 0.0 |
HOH |
3.519 |
CG2 |
O |
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| VAL | B:136 | B:160 | 77.0 | 0.497 | I | -114.5 | -54.7 | NA | NA | NA | |||||||||||||
| VAL | C:136 | C:160 | 77.0 | 0.497 | T | -113.1 | -52.8 | NA | NA | NA | |||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | VAL | A:125 | A:160 | 76.0 | 0.49 | I | -112.1 | -53.3 | 76.0 | 0.49 | 0.0 |
HOH |
2.632 |
O |
O |
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| VAL | B:125 | B:160 | 79.0 | 0.51 | I | -116.8 | -53.9 | 79.0 | 0.51 | 0.0 |
HOH |
3.316 |
O |
O |
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| VAL | C:125 | C:160 | 78.0 | 0.503 | I | -117.5 | -52.9 | 78.0 | 0.503 | 0.0 |
HOH |
2.997 |
O |
O |
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| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | VAL | A:125 | A:160 | 77.0 | 0.497 | I | -110.2 | -53.1 | 77.0 | 0.497 | 0.0 |
HOH |
3.150 |
O |
O |
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| VAL | B:125 | B:160 | 75.0 | 0.484 | I | -118.4 | -57.2 | 75.0 | 0.484 | 0.0 |
HOH |
3.170 |
O |
O |
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| VAL | C:125 | C:160 | 78.0 | 0.503 | I | -112.3 | -53.6 | NA | NA | NA | |||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | VAL | A:125 | A:160 | 85.0 | 0.548 | I | -111.5 | -51.3 | 85.0 | 0.548 | 0.0 |
HOH |
3.391 |
CG2 |
O |
||
| VAL | B:125 | B:160 | 78.0 | 0.503 | I | -113.3 | -51.4 | NA | NA | NA | |||||||||||||
| VAL | C:125 | C:160 | 84.0 | 0.542 | I | -111.3 | -51.6 | NA | NA | NA | |||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | VAL | A:125 | A:160 | 80.0 | 0.516 | I | -111.4 | -54.3 | 80.0 | 0.516 | 0.0 |
HOH |
3.953 |
CG1 |
O |
||
| VAL | B:125 | B:160 | 85.0 | 0.548 | I | -117.4 | -52.5 | 85.0 | 0.548 | 0.0 |
HOH |
3.769 |
CG2 |
O |
|||||||||
| VAL | C:125 | C:160 | 80.0 | 0.516 | I | -112.4 | -58.4 | NA | NA | NA | |||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | VAL | A:125 | A:160 | 77.0 | 0.497 | I | -116.7 | -56.7 | 77.0 | 0.497 | 0.0 |
HOH |
2.985 |
O |
O |
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| VAL | B:125 | B:160 | 81.0 | 0.523 | I | -114.6 | -52.9 | NA | NA | NA | |||||||||||||
| VAL | C:125 | C:160 | 83.0 | 0.535 | I | -119.2 | -55.9 | NA | NA | NA | |||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:125 | B:160 | 77.0 | 0.497 | I | -116.8 | -54.9 | 77.0 | 0.497 | 0.0 |
HOH |
3.068 |
O |
O |
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| VAL | B:125 | C:160 | 74.0 | 0.477 | I | -109.4 | -54.9 | 74.0 | 0.477 | 0.0 |
HOH |
2.863 |
O |
O |
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| VAL | C:125 | E:160 | 75.0 | 0.484 | I | -113.6 | -55.6 | NA | NA | NA | |||||||||||||
| VAL | D:125 | F:160 | 75.0 | 0.484 | I | -110.1 | -54.7 | NA | NA | NA | |||||||||||||
| VAL | E:125 | I:160 | 77.0 | 0.497 | I | -107.2 | -53.7 | NA | NA | NA | |||||||||||||
| VAL | F:125 | J:160 | 78.0 | 0.503 | I | -107.8 | -54.7 | NA | NA | NA | |||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:125 | A:160 | 78.0 | 0.503 | I | -110.4 | -54.8 | 78.0 | 0.503 | 0.0 |
HOH |
3.453 |
CG2 |
O |
||
| VAL | B:125 | B:160 | 75.0 | 0.484 | I | -116.2 | -50.4 | NA | NA | NA | |||||||||||||
| VAL | C:125 | C:160 | 74.0 | 0.477 | I | -119.9 | -56.6 | NA | NA | NA | |||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | VAL | A:125 | B:160 | 77.0 | 0.497 | I | -113.2 | -52.2 | 77.0 | 0.497 | 0.0 |
HOH |
5.031 |
N |
O |
||
| VAL | B:125 | A:160 | 85.0 | 0.548 | I | -114.4 | -50.2 | NA | NA | NA | |||||||||||||
| VAL | C:125 | C:160 | 79.0 | 0.51 | I | -112.8 | -49.5 | NA | NA | NA | |||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | VAL | A:123 | A:160 | 73.0 | 0.471 | I | -107.9 | -47.4 | 73.0 | 0.471 | 0.0 |
HOH |
3.596 |
CG2 |
O |
||
| VAL | B:123 | B:160 | 74.0 | 0.477 | I | -107.8 | -47.2 | 74.0 | 0.477 | 0.0 |
HOH |
3.574 |
CG1 |
O |
|||||||||
| VAL | C:123 | C:160 | 75.0 | 0.484 | I | -107.2 | -47.7 | 75.0 | 0.484 | 0.0 |
HOH |
3.414 |
CG1 |
O |
|||||||||
| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | VAL | A:123 | A:160 | 76.0 | 0.49 | I | -112.8 | -52.7 | 76.0 | 0.49 | 0.0 |
HOH |
3.682 |
CG2 |
O |
||
| VAL | B:123 | B:160 | 75.0 | 0.484 | I | -113.1 | -52.6 | 75.0 | 0.484 | 0.0 |
HOH |
3.976 |
CG2 |
O |
|||||||||
| VAL | C:123 | C:160 | 74.0 | 0.477 | I | -112.8 | -52.5 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | VAL | A:160 | A:160 | 76.0 | 0.49 | T | -114.1 | -55.2 | |