Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126097372 . C A CCDS7639.1:NM_000274.3:c.362gGt>gTt_NP_000265.1:p.121G>V Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLY A:121 A:121 42.0 0.56 H -61.9 -40.0 0.0 0.0 0.56 B:P04181:0.56
 HOH
 2.799
 N
 O
GLY B:121 B:121 43.0 0.573 H -59.2 -40.9 0.0 0.0 0.573 A:P04181:0.573
 HOH
 6.002
 O
 O
GLY C:121 C:121 41.0 0.547 H -60.4 -38.3 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLY A:121 A:121 39.0 0.52 H -58.7 -34.9 NA NA NA
GLY B:121 B:121 40.0 0.533 H -57.0 -37.0 NA NA NA
GLY C:121 C:121 40.0 0.533 H -58.7 -35.4 40.0 0.533 0.0 HOH
 5.098
 O
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLY A:121 A:121 41.0 0.547 H -59.4 -35.7 0.0 0.0 0.547 B:P04181:0.547
GLY B:121 B:121 41.0 0.547 H -59.1 -35.3 1.0 0.013 0.534 A:P04181:0.533
GLY C:121 C:121 41.0 0.547 H -59.0 -35.7 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLY A:121 A:121 40.0 0.533 H -61.0 -33.1 2.0 0.027 0.506 B:P04181:0.507
 HOH
 2.865
 N
 O
GLY B:121 B:121 39.0 0.52 H -56.9 -36.4 1.0 0.013 0.507 A:P04181:0.507
 HOH
 2.838
 N
 O
GLY C:121 C:121 41.0 0.547 H -55.5 -38.1 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLY A:97 A:121 37.0 0.493 H -63.9 -29.7 2.0 0.027 0.466 A:P04181:0.467
 HOH
 2.819
 N
 O
GLY B:97 B:121 38.0 0.507 H -65.2 -29.8 NA NA NA
GLY C:97 C:121 39.0 0.52 H -63.1 -32.1 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLY A:86 A:121 40.0 0.533 H -58.5 -31.5 1.0 0.013 0.52 B:P04181:0.52
 HOH
 2.837
 N
 O
GLY B:86 B:121 40.0 0.533 H -63.3 -33.4 1.0 0.013 0.52 A:P04181:0.52
 HOH
 2.708
 N
 O
GLY C:86 C:121 42.0 0.56 H -63.1 -32.6 42.0 0.56 0.0 HOH
 4.816
 O
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLY A:86 A:121 38.0 0.507 H -67.9 -27.6 0.0 0.0 0.507 B:P04181:0.507
 HOH
 2.818
 N
 O
GLY B:86 B:121 38.0 0.507 H -68.8 -30.4 1.0 0.013 0.494 A:P04181:0.493
 HOH
 2.841
 N
 O
GLY C:86 C:121 39.0 0.52 H -59.6 -34.5 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:86 A:121 37.0 0.493 H -62.5 -34.6 2.0 0.027 0.466 A:P04181:0.467
 HOH
 2.868
 N
 O
GLY B:86 B:121 38.0 0.507 H -64.3 -32.5 NA NA NA
GLY C:86 C:121 38.0 0.507 H -63.0 -34.8 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:86 A:121 37.0 0.493 H -61.5 -33.3 1.0 0.013 0.48 B:P04181:0.48
 HOH
 2.855
 N
 O
GLY B:86 B:121 37.0 0.493 H -63.7 -33.8 0.0 0.0 0.493 A:P04181:0.493
 HOH
 2.715
 N
 O
GLY C:86 C:121 38.0 0.507 H -63.6 -34.2 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLY A:86 A:121 36.0 0.48 H -62.4 -45.7 1.0 0.013 0.467 A:P04181:0.467
 HOH
 2.864
 N
 O
GLY B:86 B:121 38.0 0.507 H -56.5 -25.4 NA NA NA
GLY C:86 C:121 39.0 0.52 H -67.2 -31.5 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:86 B:121 39.0 0.52 H -64.5 -34.4 0.0 0.0 0.52 B:P04181:0.52
 HOH
 2.738
 N
 O
GLY B:86 C:121 40.0 0.533 H -64.3 -36.5 0.0 0.0 0.533 A:P04181:0.533
 HOH
 2.777
 N
 O
GLY C:86 E:121 39.0 0.52 H -65.9 -34.7 NA NA NA
GLY D:86 F:121 39.0 0.52 H -63.5 -36.9 NA NA NA
GLY E:86 I:121 39.0 0.52 H -63.0 -35.8 NA NA NA
GLY F:86 J:121 40.0 0.533 H -62.6 -37.0 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:86 A:121 39.0 0.52 H -65.2 -39.2 0.0 0.0 0.52 A:P04181:0.52
 HOH
 2.696
 N
 O
GLY B:86 B:121 40.0 0.533 H -63.0 -35.8 NA NA NA
GLY C:86 C:121 37.0 0.493 H -64.8 -37.7 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:86 B:121 39.0 0.52 H -63.7 -38.1 0.0 0.0 0.52 A:P04181:0.52
 HOH
 2.866
 N
 O
GLY B:86 A:121 40.0 0.533 H -64.2 -42.2 NA NA NA
GLY C:86 C:121 38.0 0.507 H -63.0 -40.6 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:84 A:121 39.0 0.52 H -59.0 -32.9 0.0 0.0 0.52 B:P04181:0.52
 HOH
 1.784
 H
 O
GLY B:84 B:121 39.0 0.52 H -58.9 -33.0 0.0 0.0 0.52 A:P04181:0.52
 HOH
 1.811
 H
 O
GLY C:84 C:121 39.0 0.52 H -58.4 -33.7 39.0 0.52 0.0 HOH
 1.785
 H
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:84 A:121 38.0 0.507 H -60.4 -29.5 0.0 0.0 0.507 B:P04181:0.507
 HOH
 1.831
 H
 O
GLY B:84 B:121 39.0 0.52 H -60.6 -29.3 0.0 0.0 0.52 A:P04181:0.52
 HOH
 2.405
 H
 O
GLY C:84 C:121 38.0 0.507 H -61.1 -28.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLY A:121 A:121 40.0 0.533 H -61.2 -30.0