Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126097423 . T A CCDS7639.1:NM_000274.3:c.311cAa>cTa_NP_000265.1:p.104Q>L Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLN A:104 A:104 1.0 0.006 H -85.4 -29.5 0.0 0.0 0.006 B:P04181:0.006
 HOH
 2.948
 NE2
 O
GLN B:104 B:104 1.0 0.006 H -90.3 -31.6 0.0 0.0 0.006 A:P04181:0.006
 HOH
 2.691
 NE2
 O
GLN C:104 C:104 1.0 0.006 H -88.5 -28.5 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLN A:104 A:104 0.0 0.0 H -81.1 -26.5 NA NA NA
GLN B:104 B:104 3.0 0.017 H -75.0 -34.0 NA NA NA
GLN C:104 C:104 4.0 0.022 H -74.8 -31.8 4.0 0.022 0.0 HOH
 2.535
 NE2
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLN A:104 A:104 2.0 0.011 H -77.9 -25.0 1.0 0.006 0.005 B:P04181:0.006
 HOH
 7.370
 CB
 O
GLN B:104 B:104 1.0 0.006 H -76.6 -26.1 0.0 0.0 0.006 A:P04181:0.006
 HOH
 2.758
 NE2
 O
GLN C:104 C:104 2.0 0.011 H -77.1 -24.9 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLN A:104 A:104 4.0 0.022 H -80.1 -29.5 3.0 0.017 0.005 B:P04181:0.006
 HOH
 2.763
 NE2
 O
GLN B:104 B:104 4.0 0.022 H -72.2 -33.0 3.0 0.017 0.005 A:P04181:0.006
 HOH
 2.946
 NE2
 O
GLN C:104 C:104 3.0 0.017 H -74.9 -34.2 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLN A:80 A:104 4.0 0.022 H -75.0 -30.3 3.0 0.017 0.005 A:P04181:0.006
 HOH
 2.740
 OE1
 O
GLN B:80 B:104 3.0 0.017 H -75.4 -28.8 NA NA NA
GLN C:80 C:104 3.0 0.017 H -74.5 -30.8 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLN A:69 A:104 2.0 0.011 H -82.8 -25.5 1.0 0.006 0.005 B:P04181:0.006
 HOH
 2.852
 NE2
 O
GLN B:69 B:104 4.0 0.022 H -78.9 -29.4 3.0 0.017 0.005 A:P04181:0.006
 HOH
 2.734
 OE1
 O
GLN C:69 C:104 3.0 0.017 H -79.6 -28.2 3.0 0.017 0.0 HOH
 2.654
 OE1
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLN A:69 A:104 4.0 0.022 H -80.4 -30.0 3.0 0.017 0.005 B:P04181:0.006
 HOH
 2.910
 OE1
 O
GLN B:69 B:104 3.0 0.017 H -77.1 -30.5 2.0 0.011 0.006 A:P04181:0.006
 HOH
 2.888
 NE2
 O
GLN C:69 C:104 4.0 0.022 H -78.4 -28.1 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLN A:69 A:104 4.0 0.022 H -76.1 -30.4 4.0 0.022 0.0 HOH
 2.676
 OE1
 O
GLN B:69 B:104 4.0 0.022 H -75.6 -29.5 NA NA NA
GLN C:69 C:104 4.0 0.022 H -74.8 -28.9 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLN A:69 A:104 2.0 0.011 H -77.7 -32.7 1.0 0.006 0.005 B:P04181:0.006
 HOH
 2.842
 NE2
 O
GLN B:69 B:104 2.0 0.011 H -80.1 -32.2 1.0 0.006 0.005 A:P04181:0.006
 HOH
 2.926
 NE2
 O
GLN C:69 C:104 0.0 0.0 H -94.7 -10.3 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLN A:69 A:104 4.0 0.022 H -80.0 -27.6 3.0 0.017 0.005 A:P04181:0.006
 HOH
 3.122
 NE2
 O
GLN B:69 B:104 2.0 0.011 H -84.4 -28.9 NA NA NA
GLN C:69 C:104 3.0 0.017 H -74.5 -32.9 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:69 B:104 3.0 0.017 H -74.9 -32.2 2.0 0.011 0.006 B:P04181:0.006
 HOH
 2.866
 NE2
 O
GLN B:69 C:104 4.0 0.022 H -75.8 -29.2 3.0 0.017 0.005 A:P04181:0.006
 HOH
 2.822
 OE1
 O
GLN C:69 E:104 3.0 0.017 H -74.9 -33.6 NA NA NA
GLN D:69 F:104 3.0 0.017 H -81.1 -28.5 NA NA NA
GLN E:69 I:104 3.0 0.017 H -72.6 -31.1 NA NA NA
GLN F:69 J:104 4.0 0.022 H -73.1 -30.8 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:69 A:104 2.0 0.011 H -80.9 -31.8 1.0 0.006 0.005 A:P04181:0.006
 HOH
 2.843
 OE1
 O
GLN B:69 B:104 3.0 0.017 H -74.7 -29.8 NA NA NA
GLN C:69 C:104 3.0 0.017 H -75.1 -36.1 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLN A:69 B:104 3.0 0.017 H -81.8 -27.2 3.0 0.017 0.0 HOH
 2.732
 OE1
 O
GLN B:69 A:104 3.0 0.017 H -81.8 -25.5 NA NA NA
GLN C:69 C:104 2.0 0.011 H -80.4 -26.9 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLN A:67 A:104 2.0 0.011 H -68.6 -34.3 1.0 0.006 0.005 B:P04181:0.006
 HOH
 2.038
 HE21
 O
GLN B:67 B:104 3.0 0.017 H -68.2 -34.0 2.0 0.011 0.006 A:P04181:0.006
 HOH
 1.906
 HE21
 O
GLN C:67 C:104 2.0 0.011 H -68.7 -34.3 2.0 0.011 0.0 HOH
 1.896
 HE21
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLN A:67 A:104 4.0 0.022 H -62.6 -32.3 3.0 0.017 0.005 B:P04181:0.006
 HOH
 1.953
 HE21
 O
GLN B:67 B:104 4.0 0.022 H -62.5 -33.0 3.0 0.017 0.005 A:P04181:0.006
 HOH
 1.946
 HE21
 O
GLN C:67 C:104 4.0 0.022 H -62.4 -32.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLN A:104 A:104 11.0 0.061 H -86.1 -32.4