Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126097456 . C A CCDS7639.1:NM_000274.3:c.278tGt>tTt_NP_000265.1:p.93C>F Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 CYS A:93 A:93 59.0 0.437 T 44.8 49.3 0.0 0.0 0.437 B:P04181:0.437
 HOH
 3.024
 N
 O
CYS B:93 B:93 60.0 0.444 T 37.8 54.5 0.0 0.0 0.444 A:P04181:0.444
 HOH
 2.820
 N
 O
CYS C:93 C:93 57.0 0.422 T 40.8 50.4 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 CYS A:93 A:93 58.0 0.43 T 44.8 52.0 NA NA NA
CYS B:93 B:93 59.0 0.437 T 51.9 54.9 NA NA NA
CYS C:93 C:93 57.0 0.422 T 48.0 51.8 57.0 0.422 0.0 HOH
 3.556
 N
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 CYS A:93 A:93 57.0 0.422 T 53.4 52.0 0.0 0.0 0.422 B:P04181:0.422
 HOH
 5.914
 O
 O
CYS B:93 B:93 57.0 0.422 T 53.2 52.1 0.0 0.0 0.422 A:P04181:0.422
CYS C:93 C:93 56.0 0.415 T 53.7 51.4 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 CYS A:93 A:93 54.0 0.4 T 56.2 50.5 1.0 0.007 0.393 B:P04181:0.393
 HOH
 2.958
 N
 O
CYS B:93 B:93 61.0 0.452 T 55.7 53.7 0.0 0.0 0.452 A:P04181:0.452
 HOH
 2.894
 N
 O
CYS C:93 C:93 75.0 0.556 T 55.1 46.3 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 CYS A:69 A:93 60.0 0.444 T 53.1 53.2 1.0 0.007 0.437 A:P04181:0.437
 HOH
 2.893
 N
 O
CYS B:69 B:93 58.0 0.43 T 52.3 51.9 NA NA NA
CYS C:69 C:93 66.0 0.489 T 53.5 53.3 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 CYS A:58 A:93 61.0 0.452 T 51.7 46.9 0.0 0.0 0.452 B:P04181:0.452
 HOH
 2.928
 N
 O
CYS B:58 B:93 60.0 0.444 T 54.1 55.2 0.0 0.0 0.444 A:P04181:0.444
 HOH
 2.880
 N
 O
CYS C:58 C:93 55.0 0.407 T 56.3 45.6 55.0 0.407 0.0 HOH
 2.747
 N
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 CYS A:58 A:93 58.0 0.43 T 53.7 52.8 1.0 0.007 0.423 B:P04181:0.422
 HOH
 2.915
 N
 O
CYS B:58 B:93 63.0 0.467 T 55.3 50.1 2.0 0.015 0.452 A:P04181:0.452
 HOH
 2.877
 N
 O
CYS C:58 C:93 58.0 0.43 T 55.3 52.5 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 CYS A:58 A:93 64.0 0.474 T 56.3 49.8 6.0 0.044 0.43 A:P04181:0.43
 HOH
 2.986
 N
 O
CYS B:58 B:93 64.0 0.474 T 55.8 49.2 NA NA NA
CYS C:58 C:93 60.0 0.444 T 56.9 48.9 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 CYS A:58 A:93 65.0 0.481 T 55.2 53.1 3.0 0.022 0.459 B:P04181:0.459
 HOH
 2.787
 N
 O
CYS B:58 B:93 65.0 0.481 T 51.7 54.5 5.0 0.037 0.444 A:P04181:0.444
 HOH
 2.734
 N
 O
CYS C:58 C:93 34.0 0.252 T 53.0 50.9 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 CYS A:58 A:93 70.0 0.519 T 48.5 48.9 12.0 0.089 0.43 A:P04181:0.43
 HOH
 2.969
 N
 O
CYS B:58 B:93 57.0 0.422 T 51.9 50.7 NA NA NA
CYS C:58 C:93 59.0 0.437 T 48.2 49.8 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:58 B:93 58.0 0.43 T 52.2 54.0 0.0 0.0 0.43 B:P04181:0.43
 HOH
 2.853
 N
 O
CYS B:58 C:93 69.0 0.511 T 53.8 49.9 8.0 0.059 0.452 A:P04181:0.452
 HOH
 2.964
 N
 O
CYS C:58 E:93 60.0 0.444 T 51.2 54.2 NA NA NA
CYS D:58 F:93 67.0 0.496 T 51.4 51.3 NA NA NA
CYS E:58 I:93 74.0 0.548 T 53.2 58.0 NA NA NA
CYS F:58 J:93 59.0 0.437 T 53.9 57.8 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:58 A:93 74.0 0.548 T 56.9 60.2 16.0 0.119 0.429 A:P04181:0.43
 HOH
 2.757
 N
 O
CYS B:58 B:93 67.0 0.496 T 56.4 58.8 NA NA NA
CYS C:58 C:93 66.0 0.489 T 54.8 59.7 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 CYS A:58 B:93 57.0 0.422 T 56.9 49.3 0.0 0.0 0.422 A:P04181:0.422
 HOH
 2.869
 N
 O
CYS B:58 A:93 57.0 0.422 T 57.7 47.9 NA NA NA
CYS C:58 C:93 59.0 0.437 T 55.7 47.3 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 CYS A:56 A:93 59.0 0.437 T 45.1 51.0 0.0 0.0 0.437 B:P04181:0.437
 HOH
 1.992
 H
 O
CYS B:56 B:93 59.0 0.437 T 43.9 51.5 0.0 0.0 0.437 A:P04181:0.437
 HOH
 3.131
 H
 O
CYS C:56 C:93 58.0 0.43 T 44.7 51.1 58.0 0.43 0.0 HOH
 2.122
 H
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 CYS A:56 A:93 62.0 0.459 T 44.1 49.7 1.0 0.007 0.452 B:P04181:0.452
 HOH
 2.121
 H
 O
CYS B:56 B:93 62.0 0.459 T 43.5 50.3 1.0 0.007 0.452 A:P04181:0.452
 HOH
 2.013
 H
 O
CYS C:56 C:93 62.0 0.459 T 43.7 50.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 CYS A:93 A:93 72.0 0.533 T 54.2 43.0