Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 126097467 | . | G | A | CCDS7639.1:NM_000274.3:c.267aaC>aaT_NP_000265.1:p.89N>N | Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-04-01 | ASN | A:89 | A:89 | 1.0 | 0.006 | T | -65.3 | -37.5 | 1.0 | 0.006 | 0.0 |
HOH |
3.067 |
ND2 |
O |
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| ASN | B:89 | B:89 | 1.0 | 0.006 | T | -65.7 | -37.5 | 1.0 | 0.006 | 0.0 |
HOH |
2.957 |
ND2 |
O |
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| ASN | C:89 | C:89 | 1.0 | 0.006 | T | -65.9 | -34.9 | NA | NA | NA | |||||||||||||
| 2oat | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-12-09 | ASN | A:89 | A:89 | 0.0 | 0.0 | T | -56.4 | -38.7 | NA | NA | NA | ||||||
| ASN | B:89 | B:89 | 1.0 | 0.006 | T | -55.9 | -38.5 | NA | NA | NA | |||||||||||||
| ASN | C:89 | C:89 | 0.0 | 0.0 | T | -57.7 | -36.4 | 0.0 | 0.0 | 0.0 |
HOH |
2.765 |
ND2 |
O |
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| 2byj | 1 | P04181 | 99.77 | 0.0 |
X-RAY |
2005-09-07 | ASN | A:89 | A:89 | 0.0 | 0.0 | T | -54.7 | -34.6 | 0.0 | 0.0 | 0.0 |
HOH |
8.896 |
N |
O |
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| ASN | B:89 | B:89 | 0.0 | 0.0 | T | -56.0 | -33.4 | 0.0 | 0.0 | 0.0 |
HOH |
2.918 |
ND2 |
O |
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| ASN | C:89 | C:89 | 0.0 | 0.0 | T | -55.5 | -34.7 | NA | NA | NA | |||||||||||||
| 2byl | 1 | P04181 | 99.32 | 0.0 |
X-RAY |
2005-09-07 | ASN | A:89 | A:89 | 1.0 | 0.006 | T | -54.7 | -34.8 | 1.0 | 0.006 | 0.0 |
HOH |
3.090 |
ND2 |
O |
||
| ASN | B:89 | B:89 | 1.0 | 0.006 | T | -57.0 | -31.8 | 1.0 | 0.006 | 0.0 |
HOH |
2.951 |
ND2 |
O |
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| ASN | C:89 | C:89 | 0.0 | 0.0 | T | -49.8 | -32.9 | NA | NA | NA | |||||||||||||
| 6hx7 | 1 | P04181 | 99.76 | 0.0 |
X-RAY |
2019-06-05 | ASN | A:65 | A:89 | 1.0 | 0.006 | T | -56.6 | -37.7 | 1.0 | 0.006 | 0.0 |
HOH |
3.055 |
ND2 |
O |
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| ASN | B:65 | B:89 | 1.0 | 0.006 | T | -53.5 | -39.5 | NA | NA | NA | |||||||||||||
| ASN | C:65 | C:89 | 1.0 | 0.006 | T | -56.5 | -38.1 | NA | NA | NA | |||||||||||||
| 5vwo | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2017-08-30 | ASN | A:54 | A:89 | 0.0 | 0.0 | T | -56.8 | -37.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.030 |
ND2 |
O |
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| ASN | B:54 | B:89 | 0.0 | 0.0 | T | -52.5 | -38.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.975 |
ND2 |
O |
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| ASN | C:54 | C:89 | 0.0 | 0.0 | T | -58.0 | -35.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.891 |
ND2 |
O |
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| 6oia | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | ASN | A:54 | A:89 | 2.0 | 0.013 | T | -48.7 | -37.7 | 2.0 | 0.013 | 0.0 |
HOH |
2.980 |
ND2 |
O |
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| ASN | B:54 | B:89 | 1.0 | 0.006 | T | -51.0 | -39.1 | 1.0 | 0.006 | 0.0 |
MQ4 HOH |
9.155 2.822 |
OD1 ND2 |
O6 O |
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| ASN | C:54 | C:89 | 1.0 | 0.006 | T | -53.5 | -35.1 | NA | NA | NA | |||||||||||||
| 6v8c | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ASN | A:54 | A:89 | 0.0 | 0.0 | T | -52.1 | -38.7 | 0.0 | 0.0 | 0.0 |
HOH |
2.922 |
ND2 |
O |
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| ASN | B:54 | B:89 | 0.0 | 0.0 | T | -51.4 | -39.4 | NA | NA | NA | |||||||||||||
| ASN | C:54 | C:89 | 0.0 | 0.0 | T | -52.9 | -36.5 | NA | NA | NA | |||||||||||||
| 6v8d | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2020-12-16 | ASN | A:54 | A:89 | 0.0 | 0.0 | T | -55.1 | -37.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.071 |
ND2 |
O |
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| ASN | B:54 | B:89 | 0.0 | 0.0 | T | -51.7 | -37.9 | 0.0 | 0.0 | 0.0 |
HOH |
2.784 |
ND2 |
O |
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| ASN | C:54 | C:89 | 1.0 | 0.006 | T | -55.8 | -38.0 | NA | NA | NA | |||||||||||||
| 7jx9 | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-01-06 | ASN | A:54 | A:89 | 0.0 | 0.0 | T | -49.7 | -39.3 | 0.0 | 0.0 | 0.0 |
IF1 HOH |
9.677 2.995 |
OD1 ND2 |
F31 O |
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| ASN | B:54 | B:89 | 1.0 | 0.006 | T | -50.9 | -39.3 | NA | NA | NA | |||||||||||||
| ASN | C:54 | C:89 | 1.0 | 0.006 | T | -51.7 | -40.2 | NA | NA | NA | |||||||||||||
| 7lnm | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ASN | A:54 | B:89 | 1.0 | 0.006 | T | -52.3 | -35.2 | 1.0 | 0.006 | 0.0 |
HOH |
3.055 |
ND2 |
O |
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| ASN | B:54 | C:89 | 0.0 | 0.0 | T | -53.9 | -36.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.176 |
ND2 |
O |
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| ASN | C:54 | E:89 | 0.0 | 0.0 | T | -51.2 | -37.5 | NA | NA | NA | |||||||||||||
| ASN | D:54 | F:89 | 0.0 | 0.0 | T | -51.5 | -37.2 | NA | NA | NA | |||||||||||||
| ASN | E:54 | I:89 | 0.0 | 0.0 | T | -50.6 | -39.0 | NA | NA | NA | |||||||||||||
| ASN | F:54 | J:89 | 0.0 | 0.0 | T | -52.2 | -39.9 | NA | NA | NA | |||||||||||||
| 7lom | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ASN | A:54 | A:89 | 0.0 | 0.0 | T | -54.0 | -37.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.026 |
ND2 |
O |
||
| ASN | B:54 | B:89 | 0.0 | 0.0 | T | -54.6 | -33.9 | NA | NA | NA | |||||||||||||
| ASN | C:54 | C:89 | 1.0 | 0.006 | T | -54.6 | -36.3 | NA | NA | NA | |||||||||||||
| 7lon | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
2021-08-25 | ASN | A:54 | B:89 | 0.0 | 0.0 | T | -50.8 | -38.0 | 0.0 | 0.0 | 0.0 |
HOH |
3.123 |
ND2 |
O |
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| ASN | B:54 | A:89 | 0.0 | 0.0 | T | -50.2 | -36.7 | NA | NA | NA | |||||||||||||
| ASN | C:54 | C:89 | 0.0 | 0.0 | T | -50.3 | -39.0 | NA | NA | NA | |||||||||||||
| 1gbn | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ASN | A:52 | A:89 | 0.0 | 0.0 | T | -55.9 | -40.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.539 |
HD21 |
O |
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| ASN | B:52 | B:89 | 0.0 | 0.0 | T | -56.0 | -40.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.160 |
HD21 |
O |
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| ASN | C:52 | C:89 | 0.0 | 0.0 | T | -56.8 | -40.4 | 0.0 | 0.0 | 0.0 |
HOH |
6.043 |
HD21 |
O |
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| 2can | 1 | P04181 | 100.0 | 0.0 |
X-RAY |
1998-06-03 | ASN | A:52 | A:89 | 0.0 | 0.0 | T | -59.7 | -33.4 | 0.0 | 0.0 | 0.0 |
HOH |
2.374 |
HD21 |
O |
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| ASN | B:52 | B:89 | 0.0 | 0.0 | T | -60.8 | -33.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.330 |
HD21 |
O |
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| ASN | C:52 | C:89 | 0.0 | 0.0 | T | -60.1 | -33.7 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p04181-f1 | 1 | P04181 | 100.0 | 0.0 | ASN | A:89 | A:89 | 1.0 | 0.006 | T | -53.2 | -38.1 | |