Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 126100589 . C A CCDS7639.1:NM_000274.3:c.152gGt>gTt_NP_000265.1:p.51G>V Homo sapiens ornithine aminotransferase (OAT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1oat 1 P04181 100.0 0.0 X-RAY
 1998-04-01 GLY A:51 A:51 35.0 0.467 S -116.3 156.2 1.0 0.013 0.454 B:P04181:0.453
 HOH
 3.018
 O
 O
GLY B:51 B:51 35.0 0.467 S -119.3 155.9 0.0 0.0 0.467 A:P04181:0.467
 HOH
 3.588
 O
 O
GLY C:51 C:51 33.0 0.44 S -118.8 153.5 NA NA NA
2oat 1 P04181 100.0 0.0 X-RAY
 1998-12-09 GLY A:51 A:51 31.0 0.413 S -119.0 152.7 NA NA NA
GLY B:51 B:51 33.0 0.44 S -112.0 154.4 NA NA NA
GLY C:51 C:51 33.0 0.44 S -117.0 154.1 33.0 0.44 0.0 HOH
 3.125
 O
 O
2byj 1 P04181 99.77 0.0 X-RAY
 2005-09-07 GLY A:51 A:51 30.0 0.4 S -116.9 152.9 1.0 0.013 0.387 B:P04181:0.387
GLY B:51 B:51 30.0 0.4 S -117.9 152.8 0.0 0.0 0.4 A:P04181:0.4
GLY C:51 C:51 31.0 0.413 S -115.9 154.0 NA NA NA
2byl 1 P04181 99.32 0.0 X-RAY
 2005-09-07 GLY A:51 A:51 32.0 0.427 S -114.7 152.4 1.0 0.013 0.414 B:P04181:0.413
 HOH
 3.094
 O
 O
GLY B:51 B:51 31.0 0.413 S -113.7 150.5 0.0 0.0 0.413 A:P04181:0.413
 HOH
 3.457
 O
 O
GLY C:51 C:51 34.0 0.453 S -111.2 153.2 NA NA NA
6hx7 1 P04181 99.76 0.0 X-RAY
 2019-06-05 GLY A:27 A:51 31.0 0.413 S -117.0 147.5 1.0 0.013 0.4 A:P04181:0.4
 HOH
 2.778
 O
 O
GLY B:27 B:51 34.0 0.453 S -116.3 152.4 NA NA NA
GLY C:27 C:51 33.0 0.44 S -116.4 149.7 NA NA NA
5vwo 1 P04181 100.0 0.0 X-RAY
 2017-08-30 GLY A:16 A:51 32.0 0.427 S -113.1 152.2 0.0 0.0 0.427 B:P04181:0.427
 HOH
 3.240
 O
 O
GLY B:16 B:51 32.0 0.427 S -113.4 149.4 0.0 0.0 0.427 A:P04181:0.427
 HOH
 3.228
 O
 O
GLY C:16 C:51 32.0 0.427 S -109.6 153.3 32.0 0.427 0.0 HOH
 3.310
 O
 O
6oia 1 P04181 100.0 0.0 X-RAY
 2019-09-18 GLY A:16 A:51 34.0 0.453 S -111.8 149.7 1.0 0.013 0.44 B:P04181:0.44
 HOH
 3.158
 O
 O
GLY B:16 B:51 33.0 0.44 S -112.3 152.0 0.0 0.0 0.44 A:P04181:0.44
 HOH
 3.232
 O
 O
GLY C:16 C:51 35.0 0.467 S -113.9 155.9 NA NA NA
6v8c 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:16 A:51 32.0 0.427 S -113.8 151.4 1.0 0.013 0.414 A:P04181:0.413
 HOH
 2.936
 O
 O
GLY B:16 B:51 35.0 0.467 S -115.2 153.4 NA NA NA
GLY C:16 C:51 33.0 0.44 S -112.8 151.2 NA NA NA
6v8d 1 P04181 100.0 0.0 X-RAY
 2020-12-16 GLY A:16 A:51 30.0 0.4 S -111.8 147.2 0.0 0.0 0.4 B:P04181:0.4
 HOH
 3.012
 O
 O
GLY B:16 B:51 31.0 0.413 S -113.9 153.0 0.0 0.0 0.413 A:P04181:0.413
 HOH
 3.297
 O
 O
GLY C:16 C:51 32.0 0.427 S -110.8 153.5 NA NA NA
7jx9 1 P04181 100.0 0.0 X-RAY
 2021-01-06 GLY A:16 A:51 35.0 0.467 S -116.3 153.4 0.0 0.0 0.467 A:P04181:0.467
 HOH
 3.155
 O
 O
GLY B:16 B:51 34.0 0.453 S -107.0 153.1 NA NA NA
GLY C:16 C:51 33.0 0.44 S -109.7 151.4 NA NA NA
7lnm 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:16 B:51 33.0 0.44 S -110.9 154.0 1.0 0.013 0.427 B:P04181:0.427
 HOH
 3.283
 O
 O
GLY B:16 C:51 34.0 0.453 S -114.6 153.4 1.0 0.013 0.44 A:P04181:0.44
 HOH
 3.130
 O
 O
GLY C:16 E:51 34.0 0.453 S -112.8 158.1 NA NA NA
GLY D:16 F:51 34.0 0.453 S -118.8 152.7 NA NA NA
GLY E:16 I:51 35.0 0.467 S -116.5 159.1 NA NA NA
GLY F:16 J:51 35.0 0.467 S -116.1 157.4 NA NA NA
7lom 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:16 A:51 33.0 0.44 S -108.2 152.2 1.0 0.013 0.427 A:P04181:0.427
 HOH
 4.982
 C
 O
GLY B:16 B:51 32.0 0.427 S -110.6 159.0 NA NA NA
GLY C:16 C:51 31.0 0.413 S -112.8 151.0 NA NA NA
7lon 1 P04181 100.0 0.0 X-RAY
 2021-08-25 GLY A:16 B:51 31.0 0.413 S -113.3 150.4 0.0 0.0 0.413 A:P04181:0.413
 HOH
 3.061
 O
 O
GLY B:16 A:51 32.0 0.427 S -111.5 148.0 NA NA NA
GLY C:16 C:51 33.0 0.44 S -111.5 150.7 NA NA NA
1gbn 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:14 A:51 32.0 0.427 S -121.0 152.4 1.0 0.013 0.414 B:P04181:0.413
 HOH
 2.931
 O
 O
GLY B:14 B:51 32.0 0.427 S -121.5 151.9 1.0 0.013 0.414 A:P04181:0.413
 HOH
 3.129
 O
 O
GLY C:14 C:51 32.0 0.427 S -121.5 152.3 32.0 0.427 0.0 HOH
 5.870
 O
 O
2can 1 P04181 100.0 0.0 X-RAY
 1998-06-03 GLY A:14 A:51 34.0 0.453 S -125.6 153.5 1.0 0.013 0.44 B:P04181:0.44
 HOH
 3.251
 O
 O
GLY B:14 B:51 36.0 0.48 S -125.3 153.2 1.0 0.013 0.467 A:P04181:0.467
 HOH
 3.662
 O
 O
GLY C:14 C:51 33.0 0.44 S -125.7 153.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04181-f1 1 P04181 100.0 0.0 GLY A:51 A:51 34.0 0.453 S -95.2 160.6