Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 131506193 . G A CCDS7660.2:NM_002412.3:c.253Gga>Aga_NP_002403.2:p.85G>R Homo sapiens O-6-methylguanine-DNA methyltransferase (MGMT), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1eh6 1 P16455 100.0 5e-151 X-RAY
2000-04-12 GLY A:54 A:54 41.0 0.547 96.8 175.4 41.0 0.547 0.0 HOH
2.720
O
O
1eh7 1 P16455 100.0 5e-151 X-RAY
2000-04-12 GLY A:54 A:54 43.0 0.573 S 103.5 174.3 43.0 0.573 0.0 HOH
2.815
O
O
1eh8 1 P16455 100.0 5e-151 X-RAY
2000-04-12 GLY A:54 A:54 37.0 0.493 104.6 179.9 37.0 0.493 0.0 HOH
2.980
O
O
1yfh 3 P16455 100.0 1e-130 X-RAY
2005-12-13 GLY E:54 A:54 23.0 0.307 T 82.2 22.5 NA NA NA
GLY F:54 B:54 60.0 0.8 S -112.1 120.8 NA NA NA
GLY G:54 NA:NA DO NA DO DO DO NA NA NA
1t39 3 P16455 99.44 5e-129 X-RAY
2004-07-13 GLY E:66 NA:NA DO NA DO DO DO NA NA NA
GLY F:66 NA:NA DO NA DO DO DO NA NA NA
1qnt 1 P16455 100.0 1e-128 X-RAY
1999-12-16 GLY A:54 A:54 40.0 0.533 73.6 -154.2 40.0 0.533 0.0 HOH
2.882
O
O
1t38 3 P16455 98.88 6e-128 X-RAY
2004-07-13 GLY C:66 NA:NA DO NA DO DO DO NA NA NA
3kzy 1 ? 89.27 9e-112 X-RAY
2010-12-15 GLY A:57 A:54 77.0 1.0 T 98.3 -14.4 77.0 1.0 0.0 HOH
2.706
O
O
GLY B:57 B:54 77.0 1.0 S 124.6 -14.9 NA NA NA
3l00 1 ? 89.27 9e-112 X-RAY
2010-12-15 GLY A:57 A:54 98.0 1.0 360.0 76.0 98.0 1.0 0.0 HOH
4.236
C
O
6sc2 2 E5BBQ0,B0I1S0 89.07 4e-111 EM
2019-09-04 GLY B:54 NA:NA DO NA DO DO DO NA NA NA
6sc2 1 E5BBQ0,B0I1S0 89.07 4e-111 EM
2019-09-04 GLY A:54 NA:NA DO NA DO DO DO NA NA NA
6rla 1 E5BBQ0,B0I1S0 89.07 4e-111 EM
2019-08-28 GLY A:54 NA:NA DO NA DO DO DO NA NA NA
GLY B:54 NA:NA DO NA DO DO DO NA NA NA
6rlb 1 E5BBQ0,B0I1S0 89.07 4e-111 EM
2019-08-28 GLY A:54 NA:NA DO NA DO DO DO NA NA NA
GLY B:54 NA:NA DO NA DO DO DO NA NA NA
3kzz 1 ? 88.7 7e-111 X-RAY
2010-12-15 GLY A:57 A:54 111.0 1.0 360.0 -15.1 111.0 1.0 0.0 HOH
2.920
O
O
6y8p 1 E5BBQ0 89.14 4e-110 X-RAY
2021-03-31 GLY A:52 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16455-f1 1 P16455 100.0 2e-151 GLY A:54 A:54 36.0 0.48 88.1 -155.3