Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50827817 . C A CCDS7232.1:NM_020549.4:c.434aCg>aAg_NP_065574.3:p.145T>K Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:27 A:27 24.0 0.171 H -59.6 -43.9 24.0 0.171 0.0 HOH
 2.729
 OG1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:27 A:27 23.0 0.164 H -64.6 -44.0 23.0 0.164 0.0 HOH
 2.721
 OG1
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:27 A:27 31.0 0.221 H -59.7 -44.5 31.0 0.221 0.0 HOH
 2.678
 OG1
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:27 A:27 32.0 0.229 H -59.6 -42.7 32.0 0.229 0.0 HOH
 3.396
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 THR A:27 A:27 30.0 0.214 H -64.9 -39.8 30.0 0.214 0.0 HOH
 2.626
 OG1
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 THR A:36 A:37 25.0 0.179 H -62.7 -44.8 25.0 0.179 0.0 HOH
 2.596
 OG1
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 THR A:37 A:37 23.0 0.164 H -61.5 -41.6 23.0 0.164 0.0 HOH
 6.568
 O
 O
THR B:37 B:37 23.0 0.164 H -60.9 -41.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 THR A:145 A:145 32.0 0.229 H -63.5 -39.7