Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50827842 . G A CCDS7232.1:NM_020549.4:c.459ttG>ttA_NP_065574.3:p.153L>L Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:35 A:35 30.0 0.176 G -108.4 1.4 30.0 0.176 0.0 HOH
 3.114
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:35 A:35 31.0 0.182 G -105.0 -2.4 31.0 0.182 0.0 HOH
 2.906
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:35 A:35 26.0 0.153 G -106.9 5.9 26.0 0.153 0.0 HOH
 3.404
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:35 A:35 32.0 0.188 G -113.6 7.4 32.0 0.188 0.0 HOH
 5.237
 CD1
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 LEU A:35 A:35 33.0 0.194 G -110.0 4.5 33.0 0.194 0.0 HOH
 3.802
 CD1
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 LEU A:44 A:45 22.0 0.129 G -107.5 0.4 22.0 0.129 0.0 HOH
 3.177
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 LEU A:45 A:45 15.0 0.088 T -114.2 -9.0 15.0 0.088 0.0 HOH
 3.859
 CD2
 O
LEU B:45 B:45 17.0 0.1 T -113.0 -8.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 LEU A:153 A:153 29.0 0.171 T -102.9 -7.2