Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50827895 . C A CCDS7232.1:NM_020549.4:c.512gCc>gAc_NP_065574.3:p.171A>D Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:53 A:53 24.0 0.209 S -72.9 152.2 24.0 0.209 0.0 HOH
 2.867
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:53 A:53 23.0 0.2 S -61.1 152.0 23.0 0.2 0.0 HOH
 2.906
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:53 A:53 23.0 0.2 S -70.1 154.9 23.0 0.2 0.0 HOH
 2.570
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:53 A:53 24.0 0.209 S -68.2 154.1 24.0 0.209 0.0 HOH
 2.584
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 ALA A:53 A:53 27.0 0.235 S -79.2 156.2 27.0 0.235 0.0 HOH
 2.565
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 ALA A:62 A:63 36.0 0.313 S -70.1 171.9 36.0 0.313 0.0 HOH
 3.113
 CA
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 ALA A:63 A:63 38.0 0.33 S -61.7 151.7 38.0 0.33 0.0 HOH
 3.042
 O
 O
ALA B:63 B:63 37.0 0.322 S -62.5 151.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 ALA A:171 A:171 35.0 0.304 S -64.4 152.7