Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50827918 . C A CCDS7232.1:NM_020549.4:c.535Ctg>Atg_NP_065574.3:p.179L>M Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:61 A:61 0.0 0.0 H -65.7 -37.4 0.0 0.0 0.0 HOH
 5.298
 CD2
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:61 A:61 0.0 0.0 H -65.1 -39.8 0.0 0.0 0.0 HOH
 5.452
 CD2
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:61 A:61 0.0 0.0 H -67.2 -38.2 0.0 0.0 0.0 HOH
 5.237
 CD2
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:61 A:61 0.0 0.0 H -68.4 -38.7 0.0 0.0 0.0 HOH
 7.024
 N
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 LEU A:61 A:61 0.0 0.0 H -66.5 -40.5 0.0 0.0 0.0 HOH
 6.021
 C
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 LEU A:70 A:71 2.0 0.012 H -61.5 -40.8 2.0 0.012 0.0 HOH
 4.956
 N
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 LEU A:71 A:71 4.0 0.024 H -63.8 -40.9 4.0 0.024 0.0 HOH
 6.948
 N
 O
LEU B:71 B:71 3.0 0.018 H -63.6 -40.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 LEU A:179 A:179 0.0 0.0 H -68.2 -38.4