Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50828554 . G A CCDS7232.1:NM_020549.4:c.593tGg>tAg_NP_065574.3:p.198W>* Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:80 A:80 13.0 0.051 H -61.4 -50.6 13.0 0.051 0.0 HOH
 2.854
 NE1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:80 A:80 13.0 0.051 H -62.6 -53.3 13.0 0.051 0.0 CHT
HOH
 7.761
3.074
 CZ2
NE1
 C5
O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:80 A:80 11.0 0.043 H -60.8 -51.0 11.0 0.043 0.0 COA
HOH
 7.174
3.032
 CH2
NE1
 S1P
O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:80 A:80 13.0 0.051 H -64.1 -51.5 13.0 0.051 0.0 SOP
HOH
 7.895
3.266
 CZ2
CD1
 S
O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 TRP A:80 A:80 13.0 0.051 H -67.5 -39.8 13.0 0.051 0.0 RMW
NA
HOH
 6.468
4.208
3.000
 CZ2
NE1
NE1
 C56
NA
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 TRP A:89 A:90 13.0 0.051 H -63.2 -49.2 13.0 0.051 0.0 HOH
 2.950
 NE1
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 TRP A:90 A:90 14.0 0.055 H -66.9 -45.3 14.0 0.055 0.0 HOH
 3.288
 CG
 O
TRP B:90 B:90 13.0 0.051 H -66.7 -45.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 TRP A:198 A:198 10.0 0.039 H -64.8 -45.6