Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50830155 . C A CCDS7232.1:NM_020549.4:c.711agC>agA_NP_065574.3:p.237S>R Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:119 A:119 17.0 0.148 H -65.7 -42.6 17.0 0.148 0.0 HOH
 2.686
 OG
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:119 A:119 17.0 0.148 H -62.8 -40.1 17.0 0.148 0.0 HOH
 3.345
 OG
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:119 A:119 13.0 0.113 H -60.0 -44.3 13.0 0.113 0.0 HOH
 4.476
 CB
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:119 A:119 13.0 0.113 H -57.2 -48.5 13.0 0.113 0.0 HOH
 7.472
 OG
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:119 A:119 8.0 0.07 H -65.2 -41.6 8.0 0.07 0.0 HOH
 2.984
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 CYS A:128 A:129 41.0 0.304 H -68.1 -25.4 41.0 0.304 0.0 HOH
 2.532
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 CYS A:129 A:129 23.0 0.17 H -63.6 -38.5 23.0 0.17 0.0 HOH
 6.991
 CB
 O
CYS B:129 B:129 23.0 0.17 H -63.9 -38.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:237 A:237 6.0 0.052 H -66.6 -36.1