Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50830171 . C A CCDS7232.1:NM_020549.4:c.727Ctc>Atc_NP_065574.3:p.243L>I Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:125 A:125 8.0 0.047 H -64.6 -36.9 8.0 0.047 0.0 HOH
 2.736
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:125 A:125 7.0 0.041 H -59.4 -43.6 7.0 0.041 0.0 HOH
 2.718
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:125 A:125 11.0 0.065 H -64.9 -40.5 11.0 0.065 0.0 HOH
 4.551
 CD1
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 LEU A:125 A:125 9.0 0.053 H -56.0 -51.9 9.0 0.053 0.0
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 LEU A:125 A:125 10.0 0.059 H -60.6 -45.4 10.0 0.059 0.0 HOH
 8.021
 N
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 LEU A:134 A:135 11.0 0.065 H -71.4 -30.6 11.0 0.065 0.0 HOH
 3.659
 CB
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 LEU A:135 A:135 12.0 0.071 H -66.6 -36.4 12.0 0.071 0.0 HOH
 7.998
 CD2
 O
LEU B:135 B:135 11.0 0.065 H -65.9 -37.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 LEU A:243 A:243 7.0 0.041 H -63.9 -36.0