Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50830176 . C A CCDS7232.1:NM_020549.4:c.732agC>agA_NP_065574.3:p.244S>R Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:126 A:126 20.0 0.174 H -65.9 -37.7 20.0 0.174 0.0 HOH
 2.575
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:126 A:126 21.0 0.183 H -65.5 -36.9 21.0 0.183 0.0 HOH
 2.403
 OG
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:126 A:126 17.0 0.148 H -74.3 -33.2 17.0 0.148 0.0 HOH
 2.692
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:126 A:126 27.0 0.235 H -70.1 -27.1 27.0 0.235 0.0
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:126 A:126 52.0 0.452 H -69.7 -34.4 52.0 0.452 0.0 HOH
 6.852
 CB
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 SER A:135 A:136 35.0 0.304 H -82.8 -26.9 35.0 0.304 0.0 HOH
 2.994
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 SER A:136 A:136 47.0 0.409 H -67.5 -48.9 47.0 0.409 0.0 HOH
 9.370
 OG
 O
SER B:136 B:136 45.0 0.391 H -67.1 -48.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:244 A:244 35.0 0.304 H -66.8 -43.1