Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50833632 . C A CCDS7232.1:NM_020549.4:c.866aCg>aAg_NP_065574.3:p.289T>K Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:171 A:171 75.0 0.536 E -126.3 126.2 75.0 0.536 0.0 HOH
 2.644
 OG1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:171 A:171 76.0 0.543 E -129.3 125.1 76.0 0.543 0.0 HOH
 2.666
 OG1
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:171 A:171 76.0 0.543 E -128.9 126.2 76.0 0.543 0.0 HOH
 2.687
 OG1
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:171 A:171 75.0 0.536 E -133.4 130.6 75.0 0.536 0.0 HOH
 7.039
 OG1
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 THR A:171 A:171 76.0 0.543 E -125.6 130.4 76.0 0.543 0.0 HOH
 3.793
 C
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 THR A:180 A:181 74.0 0.529 E -126.2 134.7 74.0 0.529 0.0 HOH
 2.698
 OG1
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 THR A:181 A:181 75.0 0.536 E -133.9 133.0 75.0 0.536 0.0 HOH
 6.233
 CG2
 O
THR B:181 B:181 75.0 0.536 E -134.6 133.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 THR A:289 A:289 60.0 0.429 E -128.4 120.4