Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50833652 . A C CCDS7232.1:NM_020549.4:c.886Agc>Cgc_NP_065574.3:p.296S>R Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:178 NA:NA DO NA DO DO DO NA NA NA
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:178 A:178 100.0 0.87 T -63.3 -20.1 100.0 0.87 0.0 HOH
 8.299
 N
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:178 NA:NA DO NA DO DO DO NA NA NA
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:178 NA:NA DO NA DO DO DO NA NA NA
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:178 NA:NA DO NA DO DO DO NA NA NA
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 SER A:187 A:188 58.0 0.504 S -145.0 -71.8 58.0 0.504 0.0 HOH
 3.575
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 SER A:188 A:188 101.0 0.878 T -96.9 -11.0 101.0 0.878 0.0 HOH
 9.664
 OG
 O
SER B:188 B:188 103.0 0.896 T -97.0 -11.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:296 A:296 93.0 0.809 G -71.9 -16.6