Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50835780 . A C CCDS7232.1:NM_020549.4:c.1060Acg>Ccg_NP_065574.3:p.354T>P Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:236 A:236 0.0 0.0 G -76.2 -5.5 0.0 0.0 0.0 HOH
 2.580
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:236 A:236 0.0 0.0 G -73.6 -6.8 0.0 0.0 0.0 HOH
 2.556
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:236 A:236 0.0 0.0 G -76.0 -7.7 0.0 0.0 0.0 HOH
 2.675
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:236 A:236 0.0 0.0 G -81.9 -4.1 0.0 0.0 0.0 HOH
 2.686
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 THR A:236 A:236 0.0 0.0 G -69.1 -2.7 0.0 0.0 0.0 HOH
 2.819
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 THR A:245 A:246 0.0 0.0 G -71.7 -21.3 0.0 0.0 0.0 HOH
 2.677
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 THR A:246 A:246 0.0 0.0 G -73.7 -11.1 0.0 0.0 0.0 HOH
 2.576
 O
 O
THR B:246 B:246 0.0 0.0 G -73.3 -10.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 THR A:354 A:354 0.0 0.0 G -70.7 -12.4