Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50854688 . G A CCDS7232.1:NM_020549.4:c.1249Ggg>Agg_NP_065574.3:p.417G>R Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 GLY A:299 A:299 1.0 0.013 T -58.6 -26.5 1.0 0.013 0.0 HOH
 2.811
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 GLY A:299 A:299 0.0 0.0 T -60.0 -18.6 0.0 0.0 0.0 HOH
 2.838
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 GLY A:299 A:299 1.0 0.013 T -60.1 -21.5 1.0 0.013 0.0 HOH
 2.909
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 GLY A:299 A:299 1.0 0.013 T -58.5 -25.6 1.0 0.013 0.0 HOH
 6.069
 CA
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 GLY A:299 A:299 0.0 0.0 T -68.2 -26.2 0.0 0.0 0.0 HOH
 2.742
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 GLY A:308 A:309 0.0 0.0 T -70.4 -15.3 0.0 0.0 0.0 HOH
 2.782
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 GLY A:309 A:309 0.0 0.0 T -57.0 -24.8 0.0 0.0 0.0 HOH
 2.955
 O
 O
GLY B:309 B:309 0.0 0.0 T -56.7 -25.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 GLY A:417 A:417 0.0 0.0 T -64.1 -22.4