Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50854702 . G A CCDS7232.1:NM_020549.4:c.1263tgG>tgA_NP_065574.3:p.421W>* Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:303 A:303 1.0 0.004 -159.4 102.7 1.0 0.004 0.0 HOH
 4.453
 CZ2
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:303 A:303 0.0 0.0 -152.6 93.3 0.0 0.0 0.0 HOH
 4.346
 CZ2
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:303 A:303 0.0 0.0 -160.5 80.7 0.0 0.0 0.0 HOH
 4.424
 CZ2
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 TRP A:303 A:303 0.0 0.0 -156.9 80.9 0.0 0.0 0.0 HOH
 5.007
 CZ2
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 TRP A:303 A:303 0.0 0.0 -145.3 94.7 0.0 0.0 0.0 HOH
 4.802
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 TRP A:312 A:313 0.0 0.0 -150.6 93.3 0.0 0.0 0.0 HOH
 4.328
 CZ2
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 TRP A:313 A:313 0.0 0.0 -156.8 87.4 0.0 0.0 0.0 HOH
 4.356
 CZ2
 O
TRP B:313 B:313 0.0 0.0 -156.9 87.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 TRP A:421 A:421 0.0 0.0 -143.0 93.4