Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857562 . G A CCDS7232.1:NM_020549.4:c.1391aGc>aAc_NP_065574.3:p.464S>N Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
2006-12-12 PRO A:346 A:346 108.0 0.745 -40.2 130.4 108.0 0.745 0.0 HOH
5.733
C
O
2fy3 1 P28329 97.23 0.0 X-RAY
2006-12-12 PRO A:346 A:346 118.0 0.814 -39.5 143.6 118.0 0.814 0.0 HOH
4.626
C
O
2fy4 1 P28329 97.23 0.0 X-RAY
2006-12-12 PRO A:346 A:346 106.0 0.731 -48.5 139.1 106.0 0.731 0.0 HOH
8.545
CD
O
2fy5 1 P28329 97.23 0.0 X-RAY
2006-12-12 PRO A:346 NA:NA DO NA DO DO DO NA NA NA
7amd 1 P28329 97.23 0.0 X-RAY
2020-10-28 PRO A:346 NA:NA DO NA DO DO DO NA NA NA
1t1u 1 P32738 88.56 0.0 X-RAY
2005-04-12 SER A:355 A:356 79.0 0.687 -162.3 -52.5 79.0 0.687 0.0 HOH
3.152
OG
O
1q6x 1 P32738 88.5 0.0 X-RAY
2004-06-01 SER A:356 A:356 NA NA NA NA NA NA NA NA
SER B:356 B:356 NA NA NA NA NA NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:464 A:464 21.0 0.183 H -58.7 -38.7