Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857579 . C A CCDS7232.1:NM_020549.4:c.1408Cga>Aga_NP_065574.3:p.470R>R Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:350 A:352 119.0 0.529 -119.6 139.7 119.0 0.529 0.0 HOH
 5.597
 CG
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:350 A:352 238.0 1.0 -31.7 120.2 238.0 1.0 0.0 HOH
 6.988
 C
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:350 A:352 218.0 0.969 -78.5 150.5 218.0 0.969 0.0 HOH
 7.199
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:350 NA:NA DO NA DO DO DO NA NA NA
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 ARG A:350 NA:NA DO NA DO DO DO NA NA NA
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 ARG A:361 A:362 198.0 0.88 S -95.8 -146.2 198.0 0.88 0.0 HOH
 3.135
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 ARG A:362 A:362 NA NA NA NA NA NA NA NA HOH
 7.752
 CA
 O
ARG B:362 B:362 NA NA NA NA NA NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 ARG A:470 A:470 247.0 1.0 -59.9 97.6