Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857591 . G A CCDS7232.1:NM_020549.4:c.1420Gtc>Atc_NP_065574.3:p.474V>I Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:354 A:356 135.0 0.871 S -138.8 113.6 135.0 0.871 0.0 HOH
 5.786
 CG2
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:354 A:356 124.0 0.8 -110.8 -92.3 124.0 0.8 0.0 HOH
 3.945
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:354 A:356 137.0 0.884 S -127.6 116.4 137.0 0.884 0.0 HOH
 6.155
 N
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:354 NA:NA DO NA DO DO DO NA NA NA
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 VAL A:354 NA:NA DO NA DO DO DO NA NA NA
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 VAL A:365 A:366 76.0 0.49 -169.7 -159.3 76.0 0.49 0.0 HOH
 3.616
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 VAL A:366 A:366 NA NA NA NA NA NA NA NA HOH
 9.025
 CA
 O
VAL B:366 B:366 NA NA NA NA NA NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 VAL A:474 A:474 44.0 0.284 -88.1 115.9