Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857606 . G A CCDS7232.1:NM_020549.4:c.1435Gcc>Acc_NP_065574.3:p.479A>T Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:358 A:361 60.0 0.522 -71.0 121.3 60.0 0.522 0.0 HOH
 3.785
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:358 A:361 60.0 0.522 -73.9 141.6 60.0 0.522 0.0 HOH
 4.174
 CB
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:358 A:361 63.0 0.548 -88.5 140.1 63.0 0.548 0.0 HOH
 4.666
 C
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:358 A:361 64.0 0.557 -85.8 147.9 64.0 0.557 0.0
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 ALA A:358 A:361 58.0 0.504 -78.0 137.5 58.0 0.504 0.0 HOH
 5.644
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 ALA A:370 A:371 50.0 0.435 -77.6 153.7 50.0 0.435 0.0 HOH
 2.719
 N
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 ALA A:371 A:371 61.0 0.53 -59.8 143.5 61.0 0.53 0.0 HOH
 3.955
 CB
 O
ALA B:371 B:371 60.0 0.522 -59.7 143.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 ALA A:479 A:479 59.0 0.513 -63.8 140.0