Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857631 . G A CCDS7232.1:NM_020549.4:c.1460tGc>tAc_NP_065574.3:p.487C>Y Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 CYS A:366 A:369 45.0 0.333 -69.9 165.2 45.0 0.333 0.0 HOH
 3.137
 C
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 CYS A:366 A:369 38.0 0.281 -70.3 -178.8 38.0 0.281 0.0 HOH
 2.833
 CB
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 CYS A:366 A:369 48.0 0.356 -80.7 153.9 48.0 0.356 0.0 HOH
 6.170
 C
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 CYS A:366 A:369 50.0 0.37 -78.6 158.0 50.0 0.37 0.0 HOH
 7.696
 SG
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 CYS A:366 A:369 35.0 0.259 -108.1 113.6 35.0 0.259 0.0 HOH
 8.300
 SG
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 CYS A:378 A:379 28.0 0.207 -99.6 111.2 28.0 0.207 0.0 HOH
 2.681
 N
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 CYS A:379 A:379 53.0 0.393 -101.9 116.1 53.0 0.393 0.0 HOH
 3.962
 CA
 O
CYS B:379 B:379 54.0 0.4 -101.7 116.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 CYS A:487 A:487 37.0 0.274 -101.0 115.2