Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50857663 . T A CCDS7232.1:NM_020549.4:c.1492Tcg>Acg_NP_065574.3:p.498S>T Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:377 A:380 4.0 0.035 H -56.6 -40.1 4.0 0.035 0.0 HOH
 2.729
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:377 A:380 4.0 0.035 H -60.1 -38.5 4.0 0.035 0.0 HOH
 2.819
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:377 A:380 3.0 0.026 H -57.8 -39.7 3.0 0.026 0.0 HOH
 2.787
 OG
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:377 A:380 2.0 0.017 H -53.3 -42.9 2.0 0.017 0.0 HOH
 5.304
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:377 A:380 2.0 0.017 H -56.6 -44.2 2.0 0.017 0.0 HOH
 2.786
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 SER A:389 A:390 4.0 0.035 H -64.2 -32.2 4.0 0.035 0.0 HOH
 2.662
 OG
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 SER A:390 A:390 3.0 0.026 H -58.0 -42.0 3.0 0.026 0.0 HOH
 2.739
 O
 O
SER B:390 B:390 3.0 0.026 H -57.2 -42.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:498 A:498 3.0 0.026 H -64.2 -35.6