Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50859934 . G A CCDS7232.1:NM_020549.4:c.1516Gta>Ata_NP_065574.3:p.506V>I Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:385 A:388 31.0 0.2 H -61.5 -54.8 31.0 0.2 0.0 HOH
 2.539
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:385 A:388 30.0 0.194 H -58.8 -42.8 30.0 0.194 0.0 HOH
 2.681
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:385 A:388 27.0 0.174 H -60.5 -49.5 27.0 0.174 0.0 HOH
 2.555
 O
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:385 A:388 28.0 0.181 H -69.6 -39.3 28.0 0.181 0.0 HOH
 3.073
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 VAL A:385 A:388 28.0 0.181 H -58.1 -49.2 28.0 0.181 0.0 HOH
 2.717
 O
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 VAL A:397 A:398 38.0 0.245 H -55.8 -48.7 38.0 0.245 0.0 HOH
 2.679
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 VAL A:398 A:398 33.0 0.213 H -59.2 -49.2 33.0 0.213 0.0 HOH
 2.700
 O
 O
VAL B:398 B:398 33.0 0.213 H -58.8 -49.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 VAL A:506 A:506 28.0 0.181 H -58.0 -43.3