Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50863160 . C A CCDS7232.1:NM_020549.4:c.1654Ccc>Acc_NP_065574.3:p.552P>T Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 PRO A:431 A:434 6.0 0.041 -53.2 123.7 6.0 0.041 0.0 HOH
 3.362
 CG
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 PRO A:431 A:434 14.0 0.097 -53.0 123.2 14.0 0.097 0.0 HOH
 3.339
 CD
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 PRO A:431 A:434 7.0 0.048 -48.8 127.8 7.0 0.048 0.0 HOH
 3.312
 CG
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 PRO A:431 A:434 17.0 0.117 -50.1 124.0 17.0 0.117 0.0 HOH
 4.033
 C
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 PRO A:431 A:434 16.0 0.11 -48.7 122.9 16.0 0.11 0.0 HOH
 3.351
 CG
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 PRO A:443 A:444 13.0 0.09 -49.0 132.3 13.0 0.09 0.0 HOH
 3.481
 CG
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 PRO A:444 A:444 16.0 0.11 -54.4 123.3 16.0 0.11 0.0 HOH
 5.290
 N
 O
PRO B:444 B:444 16.0 0.11 -54.3 122.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 PRO A:552 A:552 16.0 0.11 -48.8 116.4