Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50863184 . C A CCDS7232.1:NM_020549.4:c.1678Cgc>Agc_NP_065574.3:p.560R>S Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:439 A:442 12.0 0.053 T -71.0 -0.6 12.0 0.053 0.0 HOH
 3.080
 NH1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:439 A:442 7.0 0.031 T -68.2 -0.6 7.0 0.031 0.0 HOH
 3.312
 NH1
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:439 A:442 8.0 0.036 T -67.2 -1.6 8.0 0.036 0.0 COA
HOH
 6.958
2.880
 CD
NH1
 O5P
O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ARG A:439 A:442 8.0 0.036 T -58.6 1.8 8.0 0.036 0.0 SOP
HOH
 6.940
3.499
 CD
CG
 OP1
O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 ARG A:439 A:442 8.0 0.036 T -71.2 -5.7 8.0 0.036 0.0 RMW
HOH
 6.769
2.874
 CD
NH1
 O43
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 ARG A:451 A:452 9.0 0.04 T -64.6 -6.1 9.0 0.04 0.0 HOH
 3.020
 NH2
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 ARG A:452 A:452 12.0 0.053 T -69.2 -4.8 12.0 0.053 0.0 HOH
 3.407
 N
 O
ARG B:452 B:452 12.0 0.053 T -68.7 -5.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 ARG A:560 A:560 5.0 0.022 T -59.9 -9.5