Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50863221 . C A CCDS7232.1:NM_020549.4:c.1715tCg>tAg_NP_065574.3:p.572S>* Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:451 A:454 1.0 0.009 -67.6 -17.3 1.0 0.009 0.0 HOH
 2.620
 O
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:451 A:454 0.0 0.0 -72.5 -14.3 0.0 0.0 0.0 HOH
 2.709
 O
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:451 A:454 0.0 0.0 -68.8 -17.1 0.0 0.0 0.0 COA
HOH
 8.994
2.901
 OG
O
 CDP
O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:451 A:454 1.0 0.009 -66.2 -9.2 1.0 0.009 0.0 SOP
HOH
 8.734
3.378
 OG
CB
 CPA
O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:451 A:454 1.0 0.009 -73.9 -14.5 1.0 0.009 0.0 RMW
HOH
 9.014
2.645
 OG
O
 C34
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 SER A:463 A:464 0.0 0.0 -72.9 -12.8 0.0 0.0 0.0 HOH
 2.758
 O
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 SER A:464 A:464 1.0 0.009 -65.6 -19.5 1.0 0.009 0.0 HOH
 3.297
 CB
 O
SER B:464 B:464 1.0 0.009 -65.5 -19.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:572 A:572 1.0 0.009 -69.4 -12.4