Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50863227 . C A CCDS7232.1:NM_020549.4:c.1721aCt>aAt_NP_065574.3:p.574T>N Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:453 A:456 7.0 0.05 -77.0 164.3 7.0 0.05 0.0 HOH
 2.583
 OG1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:453 A:456 7.0 0.05 -77.3 167.6 7.0 0.05 0.0 HOH
 2.580
 OG1
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:453 A:456 11.0 0.079 -76.6 166.8 11.0 0.079 0.0 HOH
 2.610
 OG1
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:453 A:456 10.0 0.071 -68.8 166.9 10.0 0.071 0.0 HOH
 4.711
 CG2
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 THR A:453 A:456 11.0 0.079 -86.6 162.3 11.0 0.079 0.0 HOH
 2.576
 OG1
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 THR A:465 A:466 11.0 0.079 -75.4 151.2 11.0 0.079 0.0 HOH
 2.520
 OG1
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 THR A:466 A:466 11.0 0.079 -81.4 165.6 11.0 0.079 0.0 HOH
 3.950
 CB
 O
THR B:466 B:466 10.0 0.071 -81.2 165.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 THR A:574 A:574 9.0 0.064 -79.0 162.2