Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50863490 . T A CCDS7232.1:NM_020549.4:c.1835gTc>gAc_NP_065574.3:p.612V>D Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:491 A:494 75.0 0.484 H -63.2 -39.8 75.0 0.484 0.0 HOH
 3.848
 CG2
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:491 A:494 78.0 0.503 H -61.3 -39.6 78.0 0.503 0.0 HOH
 3.783
 CG2
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:491 A:494 49.0 0.316 H -59.3 -38.4 49.0 0.316 0.0 COA
HOH
 6.640
3.766
 N
CG2
 CDP
O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 VAL A:491 A:494 51.0 0.329 H -49.3 -50.7 51.0 0.329 0.0 SOP
HOH
 6.683
4.095
 N
CB
 CPA
O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 VAL A:491 A:494 49.0 0.316 H -63.4 -44.6 49.0 0.316 0.0 RMW
HOH
 6.717
3.890
 N
CG2
 C34
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 VAL A:503 A:504 79.0 0.51 H -61.2 -34.8 79.0 0.51 0.0 HOH
 4.242
 CB
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 VAL A:504 A:504 76.0 0.49 H -68.3 -36.7 76.0 0.49 0.0 HOH
 6.707
 O
 O
VAL B:504 B:504 75.0 0.484 H -67.0 -37.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 VAL A:612 A:612 47.0 0.303 H -62.0 -43.6