Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50870728 . C A CCDS7232.1:NM_020549.4:c.1877gCa>gAa_NP_065574.3:p.626A>E Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:505 A:508 0.0 0.0 H -62.3 -41.1 0.0 0.0 0.0 HOH
 6.236
 N
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:505 A:508 0.0 0.0 H -59.2 -44.6 0.0 0.0 0.0 HOH
 6.167
 N
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:505 A:508 0.0 0.0 H -57.7 -49.0 0.0 0.0 0.0 HOH
 6.373
 N
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 ALA A:505 A:508 0.0 0.0 H -57.8 -39.9 0.0 0.0 0.0 HOH
 6.363
 N
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 ALA A:505 A:508 0.0 0.0 H -63.0 -44.7 0.0 0.0 0.0 NA
HOH
 8.940
6.265
 N
N
 NA
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 ALA A:517 A:518 0.0 0.0 H -70.0 -34.2 0.0 0.0 0.0 HOH
 6.139
 N
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 ALA A:518 A:518 0.0 0.0 H -68.5 -42.7 0.0 0.0 0.0 HOH
 6.186
 N
 O
ALA B:518 B:518 0.0 0.0 H -67.6 -43.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 ALA A:626 A:626 0.0 0.0 H -65.6 -39.1