Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50870788 . C A CCDS7232.1:NM_020549.4:c.1937aCc>aAc_NP_065574.3:p.646T>N Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:525 A:528 2.0 0.014 H -61.8 -39.9 2.0 0.014 0.0 HOH
 3.643
 OG1
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:525 A:528 2.0 0.014 H -64.9 -38.1 2.0 0.014 0.0 HOH
 3.721
 OG1
 O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:525 A:528 1.0 0.007 H -64.8 -40.3 1.0 0.007 0.0 HOH
 3.379
 OG1
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 THR A:525 A:528 2.0 0.014 H -66.9 -45.1 2.0 0.014 0.0 HOH
 5.948
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 THR A:525 A:528 2.0 0.014 H -63.6 -38.3 2.0 0.014 0.0 HOH
 3.867
 OG1
 O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 THR A:537 A:538 0.0 0.0 H -67.0 -42.1 0.0 0.0 0.0 HOH
 4.819
 CB
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 THR A:538 A:538 1.0 0.007 H -56.7 -45.1 1.0 0.007 0.0 HOH
 4.614
 CB
 O
THR B:538 B:538 1.0 0.007 H -55.6 -45.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 THR A:646 A:646 0.0 0.0 H -62.8 -41.9