Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 50872926 . C A CCDS7232.1:NM_020549.4:c.2081tCt>tAt_NP_065574.3:p.694S>Y Homo sapiens choline O-acetyltransferase (CHAT), transcript variant M, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2fy2 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:573 A:576 0.0 0.0 E -124.5 151.6 0.0 0.0 0.0 HOH
 4.054
 OG
 O
2fy3 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:573 A:576 0.0 0.0 E -126.7 152.5 0.0 0.0 0.0 CHT
HOH
 8.028
4.088
 OG
OG
 C6
O
2fy4 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:573 A:576 0.0 0.0 E -131.3 149.8 0.0 0.0 0.0 HOH
 4.007
 OG
 O
2fy5 1 P28329 97.23 0.0 X-RAY
 2006-12-12 SER A:573 A:576 0.0 0.0 E -131.2 147.2 0.0 0.0 0.0 HOH
 5.971
 O
 O
7amd 1 P28329 97.23 0.0 X-RAY
 2020-10-28 SER A:573 A:576 1.0 0.009 E -124.3 151.7 1.0 0.009 0.0 RMW
NA
HOH
 8.991
7.775
4.072
 OG
C
OG
 C52
NA
O
1t1u 1 P32738 88.56 0.0 X-RAY
 2005-04-12 SER A:585 A:586 0.0 0.0 E -116.1 152.3 0.0 0.0 0.0 HOH
 4.102
 OG
 O
1q6x 1 P32738 88.5 0.0 X-RAY
 2004-06-01 SER A:586 A:586 0.0 0.0 E -132.2 158.3 0.0 0.0 0.0 NA
HOH
 7.928
4.303
 C
OG
 NA
O
SER B:586 B:586 1.0 0.009 E -131.8 158.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p28329-f1 1 P28329 99.87 0.0 SER A:694 A:694 0.0 0.0 E -119.2 148.3