Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 75239102 . T A CCDS7328.1:NM_021132.2:c.259Atg>Ttg_NP_066955.1:p.87M>L Homo sapiens protein phosphatase 3, catalytic subunit, beta isozyme (PPP3CB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4or9 1 P16298 99.8 0.0 X-RAY
 2015-05-20 MET A:107 A:87 1.0 0.005 E -114.4 104.7 1.0 0.005 0.0 HOH
 2.688
 O
 O
4orc 1 P16298 99.8 0.0 X-RAY
 2015-05-20 MET A:107 A:87 1.0 0.005 E -117.4 103.0 1.0 0.005 0.0 HOH
 5.131
 O
 O
4ora 1 P16298 99.4 0.0 X-RAY
 2015-05-20 MET A:107 A:87 2.0 0.011 E -122.5 94.5 2.0 0.011 0.0 HOH
 7.242
 CE
 O
1aui 1 Q08209 84.15 0.0 X-RAY
 1997-12-03 LEU A:78 A:78 1.0 0.006 E -118.0 106.1 1.0 0.006 0.0 HOH
 2.652
 O
 O
4orb 1 P63328 82.58 0.0 X-RAY
 2015-05-20 LEU A:78 A:78 2.0 0.012 E -121.4 101.1 2.0 0.012 0.0 HOH
 7.323
 CD2
 O
4il1 1 P62161,P63100,P63329 84.63 0.0 X-RAY
 2013-10-02 LEU A:411 A:411 1.0 0.006 E -113.4 115.7 1.0 0.006 0.0
LEU B:411 B:411 2.0 0.012 E -112.8 116.7 NA NA NA
LEU C:411 C:411 7.0 0.041 E -113.7 116.1 NA NA NA
LEU D:411 D:411 1.0 0.006 E -114.5 116.5 NA NA NA
1tco 1 P48452 87.77 0.0 X-RAY
 1997-02-12 LEU A:61 A:78 3.0 0.018 E -112.7 103.5 3.0 0.018 0.0 HOH
 2.551
 N
 O
2p6b 2 Q08209 86.74 0.0 X-RAY
 2007-06-05 LEU B:81 A:78 3.0 0.018 E -114.4 103.5 3.0 0.018 0.0 HOH
 3.151
 N
 O
LEU D:81 C:78 3.0 0.018 E -112.3 105.1 3.0 0.018 0.0 HOH
 3.033
 N
 O
1mf8 1 Q08209 87.7 0.0 X-RAY
 2002-10-16 LEU A:59 A:78 3.0 0.018 E -105.8 110.3 3.0 0.018 0.0
1m63 1 Q08209 86.99 0.0 X-RAY
 2002-09-25 LEU A:78 A:78 2.0 0.012 E -100.9 111.4 2.0 0.012 0.0
LEU E:78 E:78 16.0 0.094 E -118.6 103.6 16.0 0.094 0.0
5sve 1 Q08209 86.92 0.0 X-RAY
 2017-01-11 LEU A:78 A:78 3.0 0.018 E -111.6 105.1 3.0 0.018 0.0 HOH
 9.141
 C
 O
4f0z 1 Q08209 86.92 0.0 X-RAY
 2013-03-06 LEU A:80 A:78 5.0 0.029 E -112.8 108.0 5.0 0.029 0.0 HOH
 2.224
 H
 O
6nuc 1 Q08209 86.92 0.0 X-RAY
 2019-07-03 LEU A:80 A:78 6.0 0.035 E -118.6 104.3 6.0 0.035 0.0 HOH
 2.381
 H
 O
6nuf 1 Q08209 86.92 0.0 X-RAY
 2019-07-03 LEU A:80 A:78 3.0 0.018 E -115.1 102.9 3.0 0.018 0.0 HOH
 2.434
 H
 O
3ll8 2 Q08209 88.8 0.0 X-RAY
 2011-01-12 LEU B:65 A:78 10.0 0.059 E -114.1 110.4 10.0 0.059 0.0 HOH
 3.074
 N
 O
LEU D:65 C:78 2.0 0.012 E -115.0 112.9 NA NA NA
6nuu 1 Q08209 86.38 0.0 X-RAY
 2019-07-03 LEU A:80 A:78 2.0 0.012 E -124.3 103.8 2.0 0.012 0.0 HOH
 2.397
 H
 O
5c1v 1 Q08209 85.71 0.0 X-RAY
 2016-02-03 LEU A:77 A:78 5.0 0.029 E -118.8 106.3 5.0 0.029 0.0
LEU B:77 B:78 4.0 0.024 E -120.1 108.3 NA NA NA
6uuq 1 Q08209 87.9 0.0 X-RAY
 2020-09-09 LEU A:55 A:78 4.0 0.024 E -116.7 106.4 4.0 0.024 0.0 HOH
 3.076
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16298-f1 1 P16298 99.8 0.0 MET A:87 A:87 1.0 0.005 E -114.4 115.6
af-q08209-f1 1 Q08209 84.15 0.0 LEU A:78 A:78 0.0 0.0 E -107.4 107.3
af-p48454-f1 1 P48454 82.66 0.0 MET A:74 A:74 1.0 0.005 E -114.3 114.2