Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 75239183 . C A CCDS7328.1:NM_021132.2:c.178Gtg>Ttg_NP_066955.1:p.60V>L Homo sapiens protein phosphatase 3, catalytic subunit, beta isozyme (PPP3CB), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4or9 1 P16298 99.8 0.0 X-RAY
 2015-05-20 VAL A:80 A:60 56.0 0.361 H -60.1 -28.3 56.0 0.361 0.0 HOH
 2.661
 O
 O
4orc 1 P16298 99.8 0.0 X-RAY
 2015-05-20 VAL A:80 A:60 54.0 0.348 H -55.5 -37.6 54.0 0.348 0.0 HOH
 9.531
 O
 O
4ora 1 P16298 99.4 0.0 X-RAY
 2015-05-20 VAL A:80 A:60 55.0 0.355 H -56.4 -32.2 55.0 0.355 0.0 HOH
 3.142
 O
 O
1aui 1 Q08209 84.15 0.0 X-RAY
 1997-12-03 MET A:51 A:51 73.0 0.395 H -64.7 -20.3 73.0 0.395 0.0 HOH
 2.684
 O
 O
4orb 1 P63328 82.58 0.0 X-RAY
 2015-05-20 MET A:51 A:51 73.0 0.395 H -64.5 -25.5 73.0 0.395 0.0
4il1 1 P62161,P63100,P63329 84.63 0.0 X-RAY
 2013-10-02 MET A:384 A:384 81.0 0.438 H -68.2 -29.4 81.0 0.438 0.0 HOH
 9.476
 CG
 O
MET B:384 B:384 74.0 0.4 H -69.9 -28.8 NA NA NA
MET C:384 C:384 74.0 0.4 H -70.2 -28.7 NA NA NA
MET D:384 D:384 73.0 0.395 H -69.2 -29.2 NA NA NA
1tco 1 P48452 87.77 0.0 X-RAY
 1997-02-12 MET A:34 A:51 67.0 0.362 H -64.8 -22.6 67.0 0.362 0.0 HOH
 2.884
 O
 O
2p6b 2 Q08209 86.74 0.0 X-RAY
 2007-06-05 MET B:54 A:51 70.0 0.378 H -62.1 -21.7 70.0 0.378 0.0 HOH
 3.030
 O
 O
MET D:54 C:51 76.0 0.411 T -71.5 -15.0 76.0 0.411 0.0 HOH
 2.515
 O
 O
1mf8 1 Q08209 87.7 0.0 X-RAY
 2002-10-16 MET A:32 A:51 75.0 0.405 T -87.2 -3.5 75.0 0.405 0.0
1m63 1 Q08209 86.99 0.0 X-RAY
 2002-09-25 MET A:51 A:51 70.0 0.378 T -66.5 -18.6 70.0 0.378 0.0
MET E:51 E:51 72.0 0.389 H -82.6 -25.0 72.0 0.389 0.0
5sve 1 Q08209 86.92 0.0 X-RAY
 2017-01-11 MET A:51 A:51 74.0 0.4 H -73.8 -16.9 74.0 0.4 0.0 HOH
 8.009
 O
 O
4f0z 1 Q08209 86.92 0.0 X-RAY
 2013-03-06 MET A:53 A:51 72.0 0.389 H -66.1 -24.6 72.0 0.389 0.0 GOL
GOL
HOH
 6.285
8.476
2.669
 H
N
O
 H2
HO1
O
6nuc 1 Q08209 86.92 0.0 X-RAY
 2019-07-03 MET A:53 A:51 73.0 0.395 H -65.6 -21.8 73.0 0.395 0.0 HOH
 2.628
 HE1
 O
6nuf 1 Q08209 86.92 0.0 X-RAY
 2019-07-03 MET A:53 A:51 75.0 0.405 H -66.5 -22.1 75.0 0.405 0.0 HOH
 2.515
 HE1
 O
3ll8 2 Q08209 88.8 0.0 X-RAY
 2011-01-12 MET B:38 A:51 77.0 0.416 H -58.9 -22.3 77.0 0.416 0.0 HOH
 3.633
 CB
 O
MET D:38 C:51 72.0 0.389 H -67.0 -20.4 NA NA NA
6nuu 1 Q08209 86.38 0.0 X-RAY
 2019-07-03 MET A:53 A:51 80.0 0.432 H -63.4 -29.0 80.0 0.432 0.0 HOH
 2.377
 HE2
 O
5c1v 1 Q08209 85.71 0.0 X-RAY
 2016-02-03 MET A:50 A:51 72.0 0.389 T -66.9 -11.8 72.0 0.389 0.0
MET B:50 B:51 58.0 0.314 T -63.9 -9.0 NA NA NA
6uuq 1 Q08209 87.9 0.0 X-RAY
 2020-09-09 MET A:28 A:51 63.0 0.341 T -66.2 -23.1 63.0 0.341 0.0 HOH
 2.582
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16298-f1 1 P16298 99.8 0.0 VAL A:60 A:60 52.0 0.335 T -62.7 -20.8
af-q08209-f1 1 Q08209 84.15 0.0 MET A:51 A:51 77.0 0.416 T -62.5 -15.8
af-p48454-f1 1 P48454 82.66 0.0 VAL A:47 A:47 58.0 0.374 T -60.6 -22.8